andy-iskauskas / hmer
An R package for Bayes Linear emulation and history matching.
☆16Updated last week
Alternatives and similar repositories for hmer:
Users that are interested in hmer are comparing it to the libraries listed below
- ☆10Updated 4 months ago
- Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…☆13Updated 3 months ago
- Some code for monkeypox☆10Updated 2 years ago
- Bayesian Modelling in Epidemiology Case Line Lists☆13Updated 9 months ago
- Repository to the R package nowcaster, nowcasting with INLA☆18Updated 3 months ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆11Updated 2 years ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 2 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆18Updated last year
- ☆21Updated last month
- Code of PriorVAE: encoding spatial priors with variational autoencoders☆12Updated last year
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- ☆10Updated this week
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆17Updated 2 months ago
- This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…☆16Updated 9 months ago
- R package for Bayesian nonparametric adaptive smoothing with Stan☆9Updated 4 years ago
- Create Contact Matrices from Population Data☆19Updated 2 weeks ago
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD, Imperial College London, 2023)☆16Updated last month
- Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.☆13Updated 2 years ago
- Course on nowcasting and forecasting of infectious disease dynamcis☆14Updated 2 weeks ago
- R-package for building and fitting Bayesian ODE models in Stan☆26Updated 5 months ago
- R package for estimation and monitoring of the effective reproduction number in a pathogen outbreak/epidemic☆11Updated 5 months ago
- Workshop on hhh4 and the endemic-epidemic framework☆16Updated 2 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆15Updated 5 years ago
- Infectious disease model library and utilities☆15Updated 2 years ago
- Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"☆13Updated 2 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆27Updated 4 years ago
- Survival modelling via ODEs☆10Updated 5 months ago
- The book "Embrace Uncertainty: Fitting Mixed-Effects Models with Julia"☆21Updated 3 weeks ago