idem-lab / conmatLinks
Create Contact Matrices from Population Data
☆20Updated 3 weeks ago
Alternatives and similar repositories for conmat
Users that are interested in conmat are comparing it to the libraries listed below
Sorting:
- Course on nowcasting and forecasting of infectious disease dynamcis☆16Updated last month
- Analysing epidemic trends using AutoML approaches.☆18Updated 4 years ago
- An R package for the analysis of infectious disease transmission data☆10Updated 3 years ago
- Estimate epidemiological quantities from repeated cross-sectional prevalence measurements☆17Updated last year
- Estimate epidemiological delay distributions with brms☆15Updated last month
- R code to replicate analyses in Clark et al 2025 (Beyond single-species models: leveraging multispecies forecasts to navigate the dynamic…☆14Updated 3 months ago
- ☆29Updated last month
- ☆10Updated 8 months ago
- Bayesian Modelling in Epidemiology Case Line Lists☆13Updated last year
- CRAN Task View: Epidemiology☆22Updated 3 weeks ago
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆13Updated 2 years ago
- Infectious disease model library and utilities☆14Updated 2 years ago
- Stand alone markdowns with embedded shiny apps for various eco&epi models☆24Updated last year
- Repository to the R package nowcaster, nowcasting with INLA☆21Updated this week
- R Package for individual based epidemiological models☆30Updated 8 months ago
- R package to conduct plausibility analysis of epidemiological signals☆10Updated 8 months ago
- Analysis of COVID-19 transmission using cluster size distribution☆11Updated 2 years ago
- modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission☆17Updated last year
- Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD thesis, Imperial College London, 2023)☆16Updated 4 months ago
- Grouped dates in R☆19Updated last month
- R package for simulating and analyzing temporally autocorrelated populations.☆10Updated last year
- ☆14Updated last year
- Iterate multiple realisations of stochastic models☆19Updated 2 months ago
- R package with social contact data for 177 regions (Prem et al. 2017; Prem et al. 2021)☆9Updated 5 months ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Updated last month
- Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…☆12Updated 2 years ago
- Pre-compiled CmdStan models in R packages☆24Updated 7 months ago
- Pre-alpha {targets} workshop☆34Updated this week
- Fit stochastic differential equation models with time-varying parameters☆15Updated 3 weeks ago
- Helper functions for using mgcv☆12Updated 5 years ago