Alternatives and similar repositories for covidhm

Users that are interested in covidhm are comparing it to the libraries listed below

• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆41Updated 3 weeks ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆99Updated 4 months ago
• ropensci / nlrx
  nlrx NetLogo R
  ☆79Updated last year
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆36Updated this week
• seananderson / covidseir
  Bayesian SEIR model to estimate the effects of social-distancing on COVID-19
  ☆27Updated 4 years ago
• PredictiveEcology / NetLogoR
  A translation of NetLogo functions, dictionary, and framework for R. Intended to be used with a discrete event simulator, like SpaDES
  ☆42Updated last month
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 2 months ago
• malaria-atlas-project / malariaAtlas
  An R interface to open-access malaria data, hosted by the Malaria Atlas Project.
  ☆48Updated 4 months ago
• schochastics / snahelper
  Rstudio Addin for Network Analysis and Visualization
  ☆88Updated 2 weeks ago
• schochastics / netrankr
  An R package for network centrality
  ☆49Updated 2 weeks ago
• mplex / multigraph
  multigraph: Plot and Manipulate Multigraphs in R
  ☆22Updated 4 months ago
• paezha / Reproducible-Research-Workflow
  Notes and resources for graduate course GEOG 712 Reproducible Research Workflow with GitHub and R offered by the School of Earth, Environ…
  ☆28Updated 10 months ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆38Updated 2 years ago
• termehs / netropy
  ☆12Updated 11 months ago
• mplex / multiplex
  multiplex: algebraic tools for the analysis of multiple social networks
  ☆25Updated 8 months ago
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated 11 months ago
• paterijk / MCDA
  ☆31Updated 2 years ago
• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆19Updated last year
• neylsoncrepalde / multinets
  Multilevel Network Analysis
  ☆20Updated 5 years ago
• osofr / simcausal
  Simulating Longitudinal and Network Data with Causal Inference Applications
  ☆70Updated last year
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• RobertMyles / IRT
  IRT ideal point models in R using Stan
  ☆24Updated 6 years ago
• gasparrini / ItalyCOVIDdeath
  Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
  ☆16Updated 8 months ago
• Ecological-Complexity-Lab / infomap_ecology_package
  Package with functions to handle network data and run Infomap, inspired by ecological networks
  ☆28Updated last month
• julianfaraway / brinla
  Bayesian Regression with INLA
  ☆51Updated 2 years ago
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆20Updated last week
• guyabel / migest
  Tools for estimating, measuring and working with migration data.
  ☆33Updated 3 months ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated 2 months ago