Alternatives and similar repositories for covidhm:

Users that are interested in covidhm are comparing it to the libraries listed below

• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 2 weeks ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 2 years ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆36Updated last year
• mobs-lab / mixing-patterns
  Inferring high-resolution human mixing patterns for disease modeling
  ☆45Updated 2 years ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated 2 weeks ago
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆30Updated 6 months ago
• gasparrini / ItalyCOVIDdeath
  Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
  ☆15Updated last month
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• akira-endo / COVID19_backwardtracing
  Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing
  ☆8Updated 4 years ago
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆17Updated 5 years ago
• FluSightNetwork / cdc-flusight-ensemble
  Guidelines and forecasts for a collaborative U.S. influenza forecasting project.
  ☆38Updated 4 years ago
• wpgp / BEARmod
  Basic Epidemic, Activity, and Response COVID-19 model
  ☆31Updated 4 years ago
• majelli / Rt
  Bayesian estimation of Rt (C code)
  ☆13Updated 5 years ago
• oswaldosantos / EpiDynamics
  An R package with Dynamic Models of infectious diseases
  ☆29Updated 4 months ago
• lsbastos / Delay
  Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.
  ☆15Updated 5 years ago
• mrc-ide / reactidd
  This repository supports epidemiological and disease-dynamic analyses of data from the REal Time Assessment of Community Transmission (RE…
  ☆16Updated 10 months ago
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆35Updated last week
• SABS-R3-Epidemiology / epiabm
  Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.
  ☆17Updated 3 months ago
• EpiModel / EpiModelHIV
  Network Models of HIV Transmission Dynamics among MSM and Heterosexuals
  ☆25Updated 2 years ago
• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• calumdavey / RUG
  Repo for the LSHTM R Users Group (RUG)
  ☆9Updated 3 years ago
• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆18Updated 10 months ago
• mplex / multiplex
  multiplex: algebraic tools for the analysis of multiple social networks
  ☆23Updated last month
• goldingn / covid19_australia_interventions
  Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia
  ☆13Updated last year
• cdcepi / FluSight-forecast-hub
  ☆33Updated this week
• midas-network / flu-scenario-modeling-hub
  Flu Scenario Modeling Hub
  ☆10Updated last month
• henrileleu / covid19
  Covid19 microsimulation
  ☆15Updated 4 years ago
• kbubar / vaccine_prioritization
  ☆17Updated 4 years ago