Alternatives and similar repositories for covidhm

Users that are interested in covidhm are comparing it to the libraries listed below

• mrc-ide / squire
  SEIR transmission model of COVID-19. Documentation at:
  ☆51Updated last year
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆43Updated 2 weeks ago
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• mrc-ide / EpiEstim
  A tool to estimate time varying instantaneous reproduction number during epidemics
  ☆101Updated last week
• mrc-ide / individual
  R Package for individual based epidemiological models
  ☆32Updated 4 months ago
• kieshaprem / synthetic-contact-matrices
  Updates to the synthetic contact matrices
  ☆39Updated 2 years ago
• schochastics / netrankr
  An R package for network centrality
  ☆49Updated 3 months ago
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆55Updated last year
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆49Updated 3 years ago
• jstockwin / EpiEstimApp
  Source code for the EpiEstim app.
  ☆35Updated 5 months ago
• midas-network / covid19-scenario-modeling-hub_archive
  COVID-19 Scenario Modeling Hub
  ☆67Updated 8 months ago
• ropensci / rdhs
  API Client and Data Munging for the Demographic and Health Survey Data
  ☆38Updated 10 months ago
• malaria-atlas-project / malariaAtlas
  An R interface to open-access malaria data, hosted by the Malaria Atlas Project.
  ☆51Updated 6 months ago
• WHO-Collaboratory / collaboratory-epiparameter-community
  ☆43Updated 4 months ago
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆36Updated last month
• seananderson / covidseir
  Bayesian SEIR model to estimate the effects of social-distancing on COVID-19
  ☆27Updated 4 years ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated 4 months ago
• R4EPI / sitrep
  Report templates and helper functions for applied epidemiology
  ☆44Updated last week
• ropensci / nlrx
  nlrx NetLogo R
  ☆79Updated last month
• gasparrini / CaseTimeSeries
  The case time series design
  ☆24Updated 5 months ago
• mplex / multigraph
  multigraph: Plot and Manipulate Multigraphs in R
  ☆22Updated 7 months ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• timriffe / covid_age
  COVerAGE-DB: COVID-19 cases, deaths, and tests by age and sex
  ☆58Updated 2 years ago
• gasparrini / ItalyCOVIDdeath
  Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic
  ☆17Updated 10 months ago
• mac-theobio / McMasterPandemic
  SEIR+ model
  ☆19Updated 5 months ago
• PredictiveEcology / NetLogoR
  A translation of NetLogo functions, dictionary, and framework for R. Intended to be used with a discrete event simulator, like SpaDES
  ☆43Updated 4 months ago
• european-modelling-hubs / covid19-forecast-hub-europe_archive
  European Covid-19 Forecast Hub.
  ☆49Updated last year
• pdhoff / amen
  R package for analysis of network and dyadic data
  ☆28Updated 5 years ago
• mplex / multiplex
  multiplex: algebraic tools for the analysis of multiple social networks
  ☆25Updated 11 months ago
• termehs / netropy
  ☆12Updated last year