Alternatives and similar repositories for odemodeling

Users that are interested in odemodeling are comparing it to the libraries listed below

• MLGlobalHealth / pi-vae
  Code for utilising VAE as means of doing exact MCMC inference in complex high-dimensional space
  ☆14Updated 2 years ago
• gabriuma / basis_functions_approach_to_GP
  ☆56Updated 3 years ago
• LuZhangstat / Pathfinder
  ☆24Updated 2 years ago
• elizavetasemenova / PriorVAE
  Code of PriorVAE: encoding spatial priors with variational autoencoders
  ☆12Updated 2 years ago
• martinmodrak / modelling-in-stan-2024
  Materials for the course on Bayesian model building run at Second Faculty of Medicine at Charles University in Prague
  ☆11Updated last year
• charlesm93 / stanTutorial
  Files for StanCon 2023 tutorial.
  ☆19Updated last year
• betanalpha / mcmc_diagnostics
  Markov chain Monte Carlo general, and Hamiltonian Monte Carlo specific, diagnostics for Stan
  ☆87Updated 2 months ago
• skdeshpande91 / flexBART
  Towards a more flexible BART
  ☆22Updated last week
• andy-iskauskas / hmer
  An R package for Bayes Linear emulation and history matching.
  ☆16Updated last month
• flatironinstitute / mcmc-monitor
  Monitor MCMC runs in the browser
  ☆37Updated last year
• rok-cesnovar / stan-distributions
  A web app to visualize distributions in Stan. Uses Stan Math C++ compiled to Webassembly to evaluate the functions using actual Stan impl…
  ☆44Updated 2 years ago
• charlesm93 / StanCon2020
  Code for the talk "Approximate Bayesian inference for latent Gaussian models in Stan"
  ☆13Updated 3 years ago
• onnela-lab / gptools
  Gaussian processes on graphs and lattices in Stan.
  ☆18Updated 5 months ago
• hyunjimoon / SBC
  ☆61Updated this week
• syclik / stan-algorithms
  Reimplementation of Stan algorithms
  ☆19Updated 3 years ago
• ryantibs / quantgen
  Tools for generalized quantile modeling
  ☆15Updated 2 years ago
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 4 years ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• jtimonen / lgpr
  R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…
  ☆25Updated 2 weeks ago
• CDCgov / PyRenew
  Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
  ☆17Updated this week
• seantalts / simulation-based-calibration
  Repo for code from the SBC paper
  ☆24Updated 6 years ago
• WardBrian / scikit-stan
  A sklearn style interface to Stan regression models
  ☆25Updated 11 months ago
• rgiordan / StanSensitivity
  Tools for automatically generating local sensitivity measures in Stan.
  ☆36Updated 4 years ago
• CDCgov / measles-model-chicago-2024
  Real-Time Use of a Dynamic Model to Measure the Impact of Public Health Interventions on Measles Outbreak Size and Duration — Chicago, Il…
  ☆15Updated 10 months ago
• akira-endo / Intro-PMCMC
  Endo A. et al., "Introduction to the particle Markov-chain Monte Carlo." Epidemics, 2019.
  ☆12Updated 3 years ago
• covid19br / nowcaster
  Repository to the R package nowcaster, nowcasting with INLA
  ☆22Updated 2 weeks ago
• roualdes / bridgestan
  BridgeStan provides efficient in-memory access through Python, Julia, and R to the methods of a Stan model.
  ☆104Updated this week
• akira-endo / COVID19_clustersize
  Analysis of COVID-19 transmission using cluster size distribution
  ☆11Updated 3 years ago
• kpzoo / EpiFilter
  Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…
  ☆22Updated last year
• JuliaMixedModels / EmbraceUncertainty
  The book "Embrace Uncertainty: Fitting Mixed-Effects Models with Julia"
  ☆22Updated 2 weeks ago