Alternatives and similar repositories for COMMAND_stan

Users that are interested in COMMAND_stan are comparing it to the libraries listed below

• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated 2 years ago
• kingaa / pomp
  R package for statistical inference using partially observed Markov processes
  ☆115Updated last week
• milkha / Splines_in_Stan
  Implementation of B-Splines in Stan
  ☆51Updated 7 years ago
• vnminin / SISMID_MCMC_I
  Teaching materials for MCMC I module in the Summer Institute in Statistics and Modeling in Infectious Diseases (SISMID)
  ☆24Updated 3 years ago
• cbreto / panelPomp
  R package for statistical inference using panelPOMPs (panel Partially Observed Markov Processes)
  ☆11Updated 8 months ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆38Updated 2 weeks ago
• rsnirwan / HouseholderBPCA
  Rotation Invariant Householder Parameterization for Bayesian PCA
  ☆17Updated 2 years ago
• skdeshpande91 / VCBART
  R implementation of VCBART
  ☆21Updated 11 months ago
• bob-carpenter / diagnostic-testing
  statistical models to analyze diagnostic tests
  ☆15Updated 4 years ago
• theodds / SoftBART
  ☆31Updated this week
• objornstad / epimdr
  R package for "Epidemics: Models and data using R"
  ☆55Updated 2 years ago
• rmcelreath / cmdstan_map_rect_tutorial
  Beginner tutorial for using cmdstan with multithreading
  ☆62Updated 5 years ago
• rgiordan / StanSensitivity
  Tools for automatically generating local sensitivity measures in Stan.
  ☆36Updated 4 years ago
• jgabry / bayes-vis-paper
  'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)
  ☆65Updated 4 years ago
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 2 years ago
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 4 years ago
• stewid / SimInf
  A framework for data-driven stochastic disease spread simulations
  ☆35Updated last week
• jtimonen / lgpr
  R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…
  ☆25Updated 8 months ago
• ssp3nc3r / rethinking
  Examples from McElreath's Statistical Rethinking, First edition coded in Stan.
  ☆50Updated 6 years ago
• rmcelreath / elements_evolutionary_anthropology
  Text project for theoretical primer on human evolutionary ecology
  ☆35Updated 2 years ago
• LaplacesDemonR / LaplacesDemon
  A complete environment for Bayesian inference within R
  ☆93Updated last year
• bob-carpenter / case-studies
  Case studies in applied and computational statistics.
  ☆36Updated last week
• biouea / covidhm
  ☆23Updated 4 years ago
• MaggieLieu / STAN_tutorials
  ☆30Updated 4 years ago
• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆25Updated last week
• EpiModel / EpiModel-Gallery
  Gallery of Network-Based Epidemic Model Templates for EpiModel
  ☆54Updated 6 months ago
• lsbastos / Delay
  Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.
  ☆15Updated 5 years ago
• mpascariu / MortalityLaws
  Fit and compare the most popular human mortality laws - R package
  ☆32Updated last month
• to-mi / stan-survival-shrinkage
  Bayesian linear survival analysis with shrinkage priors in Stan
  ☆24Updated 9 years ago
• MateusMaiaDS / gpbart
  Implementation of GP-BART algorithm.
  ☆16Updated last year