Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
☆33Feb 2, 2023Updated 3 years ago
Alternatives and similar repositories for EpiNow
Users that are interested in EpiNow are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆10May 20, 2024Updated 2 years ago
- In this work, we use S-gene target failure (SGTF) as a proxy of variant status combined with reported case counts to explore the evidence…☆15Aug 20, 2026Updated 2 months ago
- Data and files from the May 25, 2021 SARS-CoV-2 viral load and infectiousness paper☆10Jan 14, 2022Updated 4 years ago
- Temporal variation in transmission during the COVID-19 outbreak☆108Nov 26, 2025Updated 11 months ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆106Oct 23, 2026Updated last week
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Updates to the synthetic contact matrices☆41Sep 27, 2023Updated 3 years ago
- ☆15Aug 18, 2021Updated 5 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆23Dec 9, 2023Updated 2 years ago
- Utility functions for the 2019-NCoV outbreak☆27Jul 15, 2020Updated 6 years ago
- Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri☆22Oct 1, 2025Updated last year
- A repository of the data and code used for aggregating expert predictions of COVID19☆11Oct 25, 2021Updated 5 years ago
- A Flexible Syntax for Population Dynamic Modelling☆10Jun 8, 2016Updated 10 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆140Updated this week
- ☆27Feb 25, 2021Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Basic Epidemic, Activity, and Response COVID-19 model☆31Jul 6, 2020Updated 6 years ago
- R package for easier interactions with the Go.Data API☆13May 15, 2023Updated 3 years ago
- ☆33Jul 28, 2026Updated 3 months ago
- Covid19 microsimulation☆14May 6, 2020Updated 6 years ago
- The R package 'phylosamp' implements novel tools that estimate the probability of transmission between two cases given phylogenetic linka…☆14May 23, 2023Updated 3 years ago
- Derive social mixing matrices from survey data.☆44Sep 28, 2026Updated last month
- A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.☆21Oct 10, 2026Updated 3 weeks ago
- Curated datasets on reported cases of the SARS-CoV-2 Omicron (B.1.1.529) Variant of Concern☆10Jan 25, 2022Updated 4 years ago
- HTML Tables with Dynamic Data in R Markdown☆17Oct 14, 2020Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆89May 19, 2020Updated 6 years ago
- ☆29May 6, 2026Updated 5 months ago
- ☣☣ Compute and visualise incidence☆57Jun 19, 2025Updated last year
- Create Contact Matrices from Population Data☆21Oct 2, 2026Updated last month
- Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…☆13Dec 18, 2022Updated 3 years ago
- Source code for the EpiEstim app.☆35Aug 7, 2025Updated last year
- Projections of future incidence☆14Dec 6, 2024Updated last year
- SEIR transmission model of COVID-19. Documentation at:☆53Feb 15, 2024Updated 2 years ago
- Create synthetic populations for COVID-19 epidemic analyses.☆50Jun 4, 2026Updated 4 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Quantifying the impacts of public health interventions on transmission of COVID-19 in Australia☆14Apr 6, 2023Updated 3 years ago
- FluSight Forecast Submissions☆20May 8, 2026Updated 5 months ago
- ☆23Jan 30, 2021Updated 5 years ago
- Supporting materials for Nishiura et al "Serial interval of novel coronavirus (COVID-19) infections" International journal of infectious …☆15Jun 2, 2020Updated 6 years ago
- Mathematical modelling of different strategies to reopen schools in the UK post COVID-19☆14Apr 21, 2022Updated 4 years ago
- Accompanying code for: Kucharski AJ, Russell TW et al. Early dynamics of transmission and control of COVID-19: a mathematical modelling s…☆71Dec 18, 2022Updated 3 years ago
- Basic Tools for the Analysis of Disease Outbreaks☆12Oct 24, 2019Updated 7 years ago