epiforecasts / EpiNow
Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
☆33Updated 2 years ago
Alternatives and similar repositories for EpiNow:
Users that are interested in EpiNow are comparing it to the libraries listed below
- FluSight Forecast Submissions☆18Updated 9 months ago
- epidemia package☆48Updated 2 years ago
- Updates to the synthetic contact matrices☆36Updated last year
- Gallery of Network-Based Epidemic Model Templates for EpiModel☆53Updated 3 months ago
- SEIR transmission model of COVID-19. Documentation at:☆51Updated last year
- SEIR+ model☆19Updated 5 months ago
- ☆23Updated 4 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆38Updated 4 years ago
- Optimised estimates of reproduction numbers over time, which extract more information from an incidence curve than many conventional appr…☆22Updated last year
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆18Updated 3 years ago
- R package for deriving social mixing matrices from survey data.☆38Updated 2 months ago
- A framework for data-driven stochastic disease spread simulations☆34Updated 2 weeks ago
- R package to implement and visualize several epidemiological forecasting methods.☆21Updated 6 months ago
- An R package with Dynamic Models of infectious diseases☆29Updated 3 months ago
- A tool to estimate time varying instantaneous reproduction number during epidemics☆95Updated 5 months ago
- COVID-19 ILI forecasting for the U.S.☆16Updated 4 years ago
- Supplementary code for paper "Bayesian workflow for disease transmission model".☆27Updated 4 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆120Updated this week
- R package for "Epidemics: Models and data using R"☆56Updated 2 years ago
- Code for reconstructing influenza dynamics from surveillance data using evidence synthesis techniques☆20Updated 2 years ago
- ☆40Updated 7 months ago
- Simulating Longitudinal and Network Data with Causal Inference Applications☆66Updated 6 months ago
- Bayesian SEIR model to estimate the effects of social-distancing on COVID-19☆27Updated 3 years ago
- Repository for all scripts required to replicate the CFR analysis for paper submission.☆71Updated 4 years ago
- Implication of overdispersed transmission of COVID-19 on the effectiveness of contact tracing☆8Updated 4 years ago
- Examples from McElreath's Statistical Rethinking, First edition coded in Stan.