Alternatives and similar repositories for mcstate

Users that are interested in mcstate are comparing it to the libraries listed below

• mrc-ide / dust
  Iterate multiple realisations of stochastic models
  ☆20Updated last month
• ropensci / dynamite
  Bayesian Inference of Complex Panel Data
  ☆35Updated 3 months ago
• seabbs / idmodelr
  Infectious disease model library and utilities
  ☆14Updated 3 years ago
• openpharma / brms.mmrm
  R package to run Bayesian MMRMs using {brms}
  ☆22Updated 2 months ago
• mike-lawrence / ezStan
  An R package containing helper functions for Stan
  ☆17Updated 3 years ago
• sambrilleman / simsurv
  Simulate Survival Data
  ☆24Updated 4 years ago
• fweber144 / shinybrms
  An R package providing a GUI ('shiny' app) for the R package 'brms'.
  ☆10Updated last week
• nt-williams / adjrct
  Doubly-Robust and Efficient Estimators for Survival and Ordinal Outcomes in RCTs Without Proportional Hazards or Odds Assumptions
  ☆11Updated 3 months ago
• nfidd / nfidd
  Course on nowcasting and forecasting of infectious disease dynamics
  ☆21Updated this week
• harrelfe / rmsb
  Regression Modeling Strategies Bayesian
  ☆17Updated 5 months ago
• jtimonen / lgpr
  R-package for interpretable nonparametric modeling of longitudinal data using additive Gaussian processes. Contains functionality for in…
  ☆26Updated last month
• vdorie / blme
  Bayesian Linear Mixed Effect Models
  ☆45Updated 7 months ago
• bonStats / tidytreatment
  Tidy methods for Bayesian treatment effect models
  ☆17Updated 3 weeks ago
• adamkucharski / 2020-cov-tracing
  Accompanying code for: Kucharski AJ, Klepac P et al. Effectiveness of isolation, testing, contact tracing, and physical distancing on red…
  ☆13Updated 2 years ago
• idem-lab / conmat
  Create Contact Matrices from Population Data
  ☆20Updated last month
• Novartis / RBesT
  Tool-set to support Bayesian evidence synthesis in R
  ☆24Updated 4 months ago
• lsbastos / Delay
  Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.
  ☆16Updated 6 years ago
• epiforecasts / inc2prev
  Estimate epidemiological quantities from repeated cross-sectional prevalence measurements
  ☆17Updated last year
• muschellij2 / matlabr
  R Package For Calling Matlab Through System
  ☆13Updated last month
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 4 years ago
• becarioprecario / INLAMCMC_examples
  Examples on INLA within MCMC
  ☆12Updated 8 years ago
• cboettig / bad-forecast-good-decision
  Utility provides a more meaningful measure of forecast skill than goodness-of-fit
  ☆18Updated 3 years ago
• mfasiolo / gamFactory
  Tools for building new GAM models in mgcv
  ☆15Updated 3 months ago
• cmu-delphi / epipredict
  Tools for building predictive models in epidemiology.
  ☆15Updated 2 weeks ago
• aallignol / survival_task_view
  CRAN Survival Task View
  ☆12Updated 4 years ago
• oswaldogressani / EpiLPS
  A fast and flexible Bayesian tool for estimation of the time-varying reproduction number.
  ☆19Updated last month
• akawiecki / statistical_rethinking_inla
  homework problems from the 2nd edition of Statistical Rethinking by Richard McElreath worked in R-INLA
  ☆24Updated 4 years ago
• mneunhoe / RGAN
  ☆18Updated 2 years ago
• mhoehle / STA427_SM4IDE
  Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH
  ☆19Updated 3 years ago
• rosannaclairebarnard / covidm-mtd-Omi
  Data and code to support Barnard et al., Modelling the medium-term dynamics of SARS-CoV-2 transmission in England in the Omicron era, Nat…
  ☆12Updated 3 years ago