khuranalab / DeepMILOLinks
☆7Updated 4 years ago
Alternatives and similar repositories for DeepMILO
Users that are interested in DeepMILO are comparing it to the libraries listed below
Sorting:
- Identifying differentially methylated regions from MethylC-seq (bisulfite-sequencing) data☆28Updated 2 years ago
- A machine-learning algorithm to predict CTCF-mediated long-range chromatin interactions☆17Updated 6 years ago
- Python library for processing and visualizing Hi-C data☆20Updated 5 years ago
- Circular RNA Identification for Nanopore Sequencing☆19Updated last year
- SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)☆12Updated last week
- ☆20Updated last year
- ☆48Updated 2 years ago
- Identifying genome-wide translated open reading frames using ribosome profiling☆23Updated 2 years ago
- Detection and couting alternative TSS in single cells☆14Updated last year
- An Optimized Nested TAD caller for Hi-C data☆22Updated 3 years ago
- Motif Scan and Enrichment Analysis (MoSEA)☆16Updated 4 years ago
- RepEnrich2 is an updated method to estimate repetitive element enrichment using high-throughput sequencing data.☆39Updated 3 years ago
- IDR☆31Updated 2 years ago
- RNA editing quantification in deep transcriptome data☆15Updated 2 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- Software to compute reproducibility and quality scores for Hi-C data☆48Updated 6 years ago
- optimization of ribosome P-site positioning in ribosome profiling data☆52Updated 4 months ago
- Comprehensive and scalable differential splicing analyses☆17Updated 3 months ago
- ☆19Updated 2 years ago
- Bioinformatic tool for Splice site Strength Estimation using RNA-seq☆17Updated 3 weeks ago
- splicekit: an integrative toolkit for splicing analysis from short-read RNA-seq☆17Updated 3 months ago
- ☆39Updated 9 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆35Updated 11 months ago
- Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from…☆31Updated 3 weeks ago
- ☆17Updated 6 years ago
- Epimap processing and analysis code repository☆33Updated 2 years ago
- Comparison of Hi-C Experiments using Structural Similarity.☆28Updated last year
- Capturing protein-RNA interaction footprints from single-nucleotide CLIP-seq data☆31Updated 3 years ago
- a toolset for mining multi-dimensional features of the translatome with ribosome profiling data☆18Updated 5 months ago
- ☆20Updated 5 years ago