Python wrapper for MaxEntScan to calculate splice site strength.
☆18Jul 8, 2022Updated 3 years ago
Alternatives and similar repositories for maxentpy
Users that are interested in maxentpy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- These scripts reformat a VCF into a SQLite database, with R☆15Jul 15, 2021Updated 4 years ago
- python wrapper to dpryan79's bigwig library using cffi☆19May 13, 2016Updated 9 years ago
- ☆27Mar 2, 2026Updated last month
- CircRNA testing and ploting R package☆10Nov 23, 2020Updated 5 years ago
- Tissue-specific variant effect predictions on splicing☆42May 23, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- TIDDIT - structural variant calling☆10Dec 8, 2025Updated 4 months ago
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆24Feb 21, 2022Updated 4 years ago
- The C. elegans transcriptome at single cell resolution☆11Mar 28, 2018Updated 8 years ago
- ☆16Jun 3, 2025Updated 10 months ago
- ☆24Jul 29, 2025Updated 8 months ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆17Apr 7, 2020Updated 6 years ago
- Hyper-parameter optimization for Keras☆46Mar 21, 2021Updated 5 years ago
- Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data☆12Dec 11, 2025Updated 4 months ago
- fast webservices based query tool for large sets of genomic features☆26May 10, 2025Updated 11 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆13Dec 3, 2018Updated 7 years ago
- pathoscore evaluates variant pathogenicity tools and scores.☆22Mar 25, 2022Updated 4 years ago
- An efficient Variant-Caller to highlight low allele-frequency tumor mutations in a clinical practice☆11Jun 5, 2023Updated 2 years ago
- Basic UPD caller☆12Aug 23, 2021Updated 4 years ago
- mon blog disponible sur dridk.me☆11Oct 28, 2024Updated last year
- K-RET: Knowledgeable Biomedical Relation Extraction System☆10Feb 22, 2025Updated last year
- A tool kit to manage many variant on desktop computer☆13Jan 13, 2026Updated 2 months ago
- Gene Environment Interaction Estimator☆12Dec 11, 2025Updated 4 months ago
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Transcriptome-wide network☆16Jul 27, 2019Updated 6 years ago
- RNAseq pipeline for alternative splicing junctions☆14Mar 26, 2026Updated 2 weeks ago
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Dec 4, 2025Updated 4 months ago
- A simple python SDK around PubMed API.☆21Jan 1, 2025Updated last year
- In-depth analysis of normalization and transformation methods for building coexpression networks from RNA-seq data.☆15Aug 4, 2023Updated 2 years ago
- Detecting Aberrant Splicing Events from RNA-sequencing data☆16Dec 10, 2024Updated last year
- A deletion finder through re-aligning the whole soft-clipping read☆12Jul 2, 2016Updated 9 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Dec 9, 2021Updated 4 years ago
- hyb: a bioinformatics pipeline for the analysis of CLASH (crosslinking, ligation and sequencing of hybrids) data☆13Jul 12, 2024Updated last year
- DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A new tool to infer sex from massively parallel sequencing data.☆17May 16, 2025Updated 10 months ago
- Formation continue sur la FAIRisation du code informatique☆10Jun 15, 2022Updated 3 years ago
- VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF f…☆19Oct 27, 2021Updated 4 years ago
- Saluki, a method to predict mRNA half-lives from sequence☆27Oct 7, 2022Updated 3 years ago
- Get a nicely-chunked local copy of the biomedical literature (to use for other projects)!☆15Jun 10, 2024Updated last year
- Ontoclick - A web browser extension to turn highlighted text into a proper Ontology term.☆13Jun 2, 2023Updated 2 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆51Aug 13, 2024Updated last year