kanaverse / kanaView external linksLinks
Single cell analysis in the browser
☆155Oct 26, 2025Updated 3 months ago
Alternatives and similar repositories for kana
Users that are interested in kana are comparing it to the libraries listed below
Sorting:
- Single cell analysis in Javascript☆22Nov 28, 2025Updated 2 months ago
- Read RDS files, in Python☆25Feb 9, 2026Updated last week
- Interactively analyze single cell genomic data☆184Jan 14, 2026Updated last month
- Bring your single-cell data to life☆95Jan 19, 2026Updated 3 weeks ago
- 🧭 Navigate single-cell RNA-seq datasets in your web browser.☆30Jul 13, 2023Updated 2 years ago
- Vitessce is a visual integration tool for exploration of spatial single-cell experiments.☆238Updated this week
- An interactive explorer for single-cell transcriptomics data☆751Updated this week
- Single-cell analysis with non-negative matrix factorization☆48Jul 24, 2025Updated 6 months ago
- ☆11Sep 5, 2018Updated 7 years ago
- home of the bear's lair☆10May 19, 2017Updated 8 years ago
- Visualize genomic data using webgl and webworkers, in an effort to provide a fluid, high-performance user experience.☆11May 24, 2024Updated last year
- A Shiny web app for mapping datasets using Seurat v4☆144Nov 5, 2024Updated last year
- A web-based interactive (wizard style) application to perform a guided single-cell RNA-seq data analysis and clustering based on Seurat v…☆32Sep 14, 2020Updated 5 years ago
- Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).☆87Dec 4, 2025Updated 2 months ago
- A tool for analyzing trascriptomes of millions of single cells.☆92Jan 23, 2026Updated 3 weeks ago
- CellRank: dynamics from multi-view single-cell data☆427Updated this week
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 2 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 2 years ago
- Semi-supervised adversarial neural networks for classification of single cell transcriptomics data☆77Jan 23, 2026Updated 3 weeks ago
- main repo: https://github.com/ucscGenomeBrowser/cellBrowser/ - Python pipeline and Javascript scatter plot library for single-cell datase…☆114Jan 20, 2023Updated 3 years ago
- Fast FASTQ sample demultiplexing in Rust.☆66Feb 4, 2026Updated last week
- characterizing spatial gene expression heterogeneity in spatially resolved single-cell transcriptomics data with nonuniform cellular dens…☆84Jun 7, 2022Updated 3 years ago
- Collections of library structure and sequence of popular single cell genomic methods☆492May 19, 2025Updated 8 months ago
- ☆57Jan 2, 2024Updated 2 years ago
- Interpretation of cell states using reference single-cell maps☆310Dec 19, 2025Updated last month
- A Rust library and command line tool for working with genomic ranges and their data.☆101May 29, 2024Updated last year
- Single-Cell Analysis of Inter-Individual Variability by Interpretable Tensor Decomposition☆63Apr 14, 2024Updated last year
- Scaling Single Cell Analysis to Millions of Cells☆257Jan 13, 2026Updated last month
- Bioconductor package for management of multi-assay data☆73Nov 17, 2025Updated 2 months ago
- Transcript quantification import with automatic metadata detection☆67Feb 3, 2026Updated last week
- Reference mapping for single-cell genomics☆398Dec 2, 2025Updated 2 months ago
- A performant scientific image visualization system.☆36Jan 21, 2026Updated 3 weeks ago
- Command line scientific data management tool☆231Nov 4, 2024Updated last year
- Enables cellxgene to generate violin, stacked violin, stacked bar, heatmap, volcano, embedding, dot, track, density, 2D density, sankey a…☆161Jan 27, 2026Updated 3 weeks ago
- Differential expression analysis for single-cell RNA-seq data.☆206Oct 21, 2025Updated 3 months ago
- Spatial omics analysis toolbox☆360Updated this week
- A Bayesian model for compositional single-cell data analysis☆188Jan 13, 2026Updated last month
- A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust☆32Nov 14, 2025Updated 3 months ago
- iCellR is an interactive R package designed to facilitate the analysis and visualization of high-throughput single-cell sequencing data. …☆128Nov 10, 2025Updated 3 months ago