This repo is outdated. Please use https://github.com/pylelab/USalign instead
☆17May 26, 2021Updated 5 years ago
Alternatives and similar repositories for TMalign
Users that are interested in TMalign are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A fast sampling and analysis tool for biomolecules☆18Aug 2, 2026Updated 2 weeks ago
- Contact map alignment☆16May 10, 2018Updated 8 years ago
- ☆13May 15, 2024Updated 2 years ago
- Non-sequential structural alignment program for protein structure☆19Apr 10, 2026Updated 4 months ago
- Ancestral sequence reconstruction with gap-state inference using IQ-TREE☆14Jul 26, 2026Updated 3 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A curated biochemical database that integrates and refines data from KEGG and ATLAS databases to support precise analyses of biochemical …☆16May 13, 2026Updated 3 months ago
- Contact map alignment☆44Feb 3, 2021Updated 5 years ago
- Ancestral Sequence Reconstruction in Python☆15May 9, 2019Updated 7 years ago
- maestro file parser☆29Mar 10, 2026Updated 5 months ago
- Rapid Annotation Transfer Tool☆10May 21, 2025Updated last year
- ☆27Dec 6, 2022Updated 3 years ago
- Protein interaction calculator☆15Feb 11, 2025Updated last year
- Based off of the official Rostlab & PredictProtein website installation, as of 2020-09-07, the produced Docker image from this repository…☆15Feb 13, 2023Updated 3 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains the codebase for the paper "Leveraging ancestral sequence reconstruction for protein representation learning".☆13Jun 24, 2026Updated last month
- MolSurfComp is a Matlab package for molecular surface computation, in particular, for the solvent excluded surface (SES). It allows to co…☆10Feb 1, 2021Updated 5 years ago
- Application to assign secondary structure to proteins☆269Updated this week
- Sample-specific CircRNA Viewer☆11Aug 15, 2018Updated 8 years ago
- k-mer based Pipeline to identify the Serotype from Illumina NGS reads☆27Jul 13, 2023Updated 3 years ago
- zjut master thesis☆11Mar 15, 2024Updated 2 years ago
- Code for our paper "Protein sequence design with a learned potential"☆81Sep 8, 2023Updated 2 years ago
- asyncmd is a library to write concurrent code to run and analyze molecular dynamics simulations using pythons async/await syntax. Computa…☆20Jul 16, 2026Updated last month
- Benchmarking common tasks on proteins in various languages and packages☆42Dec 27, 2020Updated 5 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ASAP-SML: An Antibody Sequence Analysis Pipeline Using Statistical Testing and Machine Learning☆11Jul 6, 2023Updated 3 years ago
- Modelling RBP binding preferences to predict RPB binding sites☆11Aug 11, 2023Updated 3 years ago
- A dependency-free cross-platform swiss army knife for PDB files.☆457Jun 10, 2026Updated 2 months ago
- ☆16Oct 29, 2025Updated 9 months ago
- FTDMP is a software system for running docking experiments and scoring/ranking multimeric models.☆14Aug 3, 2026Updated 2 weeks ago
- Interactive application to verify multiple LLMs☆15Feb 20, 2024Updated 2 years ago
- ☆18Jan 13, 2023Updated 3 years ago
- An open-source library for the analysis of protein interactions.☆36Dec 5, 2021Updated 4 years ago
- A little simple blog for my python practice.☆10Jul 6, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- NuFold: End-to-End Approach for RNA Tertiary Structure Prediction with Flexible Nucleobase Center Representation☆53Oct 31, 2025Updated 9 months ago
- Open source code for AlphaFold.☆39May 6, 2026Updated 3 months ago
- Automatic CHARMM-GUI browser interaction with Python☆20Mar 20, 2023Updated 3 years ago
- SRA python tools☆11Jun 9, 2021Updated 5 years ago
- AntiRef: reference clusters of human antibody sequences☆12Apr 18, 2024Updated 2 years ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆179Oct 10, 2019Updated 6 years ago
- ☆11Sep 7, 2017Updated 8 years ago