kWeissenow / EMBER3DLinks
Ultra-fast in-silico structure mutation
☆34Updated 6 months ago
Alternatives and similar repositories for EMBER3D
Users that are interested in EMBER3D are comparing it to the libraries listed below
Sorting:
- Fast deep learning methods for large-scale protein-protein interaction screening☆75Updated 2 months ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆71Updated 3 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆58Updated 6 months ago
- ☆41Updated last year
- Efficient manipulation of protein structures in Python☆58Updated last week
- ☆42Updated last month
- ☆46Updated 8 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆66Updated 10 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆66Updated 2 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆64Updated last year
- ☆53Updated last month
- ☆71Updated 6 months ago
- ☆68Updated 11 months ago
- Code for holographic machine learning of proteins☆24Updated 11 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆54Updated 3 weeks ago
- ☆36Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- ☆86Updated last year
- Efficient implementatin of ESM family.☆74Updated last month
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 6 months ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆63Updated 3 weeks ago
- Machine learning prediction of enzyme optimum pH☆45Updated 5 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 2 months ago
- Learning the language of protein-protein interactions☆98Updated 2 weeks ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆39Updated 4 years ago
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated last month
- Fast indexing and search of discontinuous motifs in protein structures☆86Updated last week