kWeissenow / EMBER3DLinks
Ultra-fast in-silico structure mutation
☆36Updated 9 months ago
Alternatives and similar repositories for EMBER3D
Users that are interested in EMBER3D are comparing it to the libraries listed below
Sorting:
- Fast and accurate protein domain segmentation using Invariant Point Attention☆44Updated 7 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)…☆63Updated 2 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Updated last month
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆47Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆77Updated 2 months ago
- ☆37Updated 2 years ago
- Code for holographic machine learning of proteins☆24Updated last year
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago
- Efficient manipulation of protein structures in Python☆61Updated 3 months ago
- ☆55Updated 5 months ago
- ☆41Updated 4 months ago
- Metrics for our protein design competitions.☆35Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆66Updated 4 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆114Updated 5 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆70Updated last year
- ☆72Updated 10 months ago
- Extension of ThermoMPNN for double mutant predictions☆51Updated 3 months ago
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- Tool for modelling the CDRs of antibodies☆50Updated 3 years ago
- ☆43Updated 2 years ago
- Results and data from the pilot round of the Protein Engineering Tournament☆30Updated 9 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆101Updated this week
- Tools for annotation, processing and ML for antibody sequences☆37Updated last week
- ☆89Updated last year
- ☆93Updated 3 months ago
- Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models☆60Updated 2 months ago
- Enzyme datasets used to benchmark enzyme-substrate promiscuity models☆40Updated 4 years ago
- ☆73Updated last year
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago