Alternatives and similar repositories for PepFun

Users that are interested in PepFun are comparing it to the libraries listed below

• dina-lab3D / CombFold
  ☆86Updated 11 months ago
• rochoa85 / PepFun2
  PepFun 2.0: improved protocols for the analysis of natural and modified peptides
  ☆25Updated 2 years ago
• Boehringer-Ingelheim / pyPept
  pyPept: a python library to generate atomistic 2D and 3D representations of peptides
  ☆76Updated last year
• patrickbryant1 / AFProfile
  Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile
  ☆69Updated last year
• Andre-lab / evodock
  A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking
  ☆29Updated 2 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆33Updated 7 years ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆57Updated this week
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆29Updated 3 years ago
• Nucleus2014 / protease-gcnn-pytorch
  ☆21Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆52Updated last month
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated last year
• liedllab / surface_analyses
  Scores for Hydrophobicity and Charges based on SASAs
  ☆37Updated 3 months ago
• tubiana / protocolGromacs
  Automatic gromacs protocol from preparation to production with ligand parametrization through
  ☆72Updated 5 months ago
• RosettaCommons / Rosetta-DL
  A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
  ☆36Updated 2 years ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆32Updated last year
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆54Updated this week
• guyuehuo / opendock
  ☆50Updated 9 months ago
• sokrypton / af2bind
  ☆49Updated 2 months ago
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆55Updated 2 months ago
• matteoferla / rdkit_to_params
  Create or modify Rosetta params files (topology files) from scratch, RDKit mols or another params file
  ☆35Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆65Updated 10 months ago
• patrickbryant1 / MoLPC
  Modelling of Large Protein Complexes
  ☆37Updated last month
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆66Updated 2 months ago
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆43Updated last month
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆48Updated 4 years ago
• lcbc-epfl / metal-site-prediction
  ☆39Updated last year
• silicogenesis / protkit
  A Unified Approach to Protein Engineering
  ☆42Updated last year
• ullahsamee / PyMOLfold
  Plugin for folding sequences directly in PyMOL
  ☆27Updated last month
• AlexanderKroll / ProSmith
  ☆28Updated 10 months ago