RosettaCommons / Rosetta-DLLinks
A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons
☆36Updated 2 years ago
Alternatives and similar repositories for Rosetta-DL
Users that are interested in Rosetta-DL are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated 2 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Making Protein folding accessible to all!☆23Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated this week
- code for IDR binding paper 2025☆51Updated 7 months ago
- pyFoldX: python bindings for FoldX.☆48Updated 4 years ago
- ☆44Updated last year
- Physical energy function for protein sequence design☆33Updated 2 years ago
- ☆49Updated 2 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆69Updated last year
- ☆71Updated 5 months ago
- PyDock Tutorial☆33Updated 7 years ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- ☆75Updated 7 months ago
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 2 months ago
- ☆87Updated last month
- Source code and examples for AlphaFold Unmasked☆73Updated 3 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆36Updated 3 months ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆48Updated 2 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆88Updated 3 weeks ago
- Efficient manipulation of protein structures in Python☆56Updated last week
- ☆35Updated 5 months ago
- ☆36Updated last year
- Modelling protein conformational landscape with Alphafold☆52Updated 2 weeks ago
- PepFun 2.0: improved protocols for the analysis of natural and modified peptides☆25Updated 2 years ago
- ☆52Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- Tool for modelling the CDRs of antibodies☆50Updated 2 years ago