labstructbioinf / localpdb
Python package to manage protein structures and their annotations
☆42Updated last year
Alternatives and similar repositories for localpdb:
Users that are interested in localpdb are comparing it to the libraries listed below
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆54Updated last month
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Kuhlman Lab Installation of AlphaFold3☆25Updated last month
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆27Updated last year
- ☆38Updated 7 months ago
- ☆49Updated last month
- GTalign, HPC protein structure alignment, superposition and search (alpha release)☆42Updated 3 months ago
- Machine learning prediction of enzyme optimum pH☆33Updated last week
- Python package to atom map, correct and suggest enzymatic reactions☆38Updated last year
- ☆28Updated last year
- A domain parser for Alphafold models☆35Updated last year
- Efficient manipulation of protein structures in Python☆53Updated 6 months ago
- A bundle of deep-learning packages for biomolecular structure prediction and design contributed to the Rosetta Commons☆35Updated 2 years ago
- Fast and accurate protein domain segmentation using Invariant Point Attention☆38Updated 5 months ago
- ☆66Updated last month
- ☆38Updated 3 months ago
- Source code and examples for AlphaFold Unmasked☆62Updated 2 weeks ago
- Scores for Hydrophobicity and Charges based on SASAs☆31Updated last month
- Fast and accurate protein structure prediction☆52Updated 3 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆49Updated 3 weeks ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆56Updated 2 months ago
- Tools for annotation, processing and ML for antibody sequences☆27Updated this week
- Modelling of Large Protein Complexes☆37Updated last year
- PyPEF – Pythonic Protein Engineering Framework☆24Updated 2 weeks ago
- Graph-based community clustering approach to extract protein domains from a predicted aligned error matrix☆35Updated 2 years ago
- ☆15Updated 2 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆27Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆50Updated 5 months ago
- The official codebase of peptidy, a peptide processing tool for machine learning.☆30Updated last week
- Ultra-fast in-silico structure mutation☆32Updated 3 weeks ago