labstructbioinf / localpdbLinks
Python package to manage protein structures and their annotations
☆44Updated last year
Alternatives and similar repositories for localpdb
Users that are interested in localpdb are comparing it to the libraries listed below
Sorting:
- Fast and accurate protein domain segmentation using Invariant Point Attention☆41Updated 4 months ago
- ☆53Updated last month
- Ultra-fast in-silico structure mutation☆34Updated 5 months ago
- Parametric Building of de novo Functional Topologies☆44Updated 3 years ago
- Kuhlman Lab Installation of AlphaFold3☆34Updated last week
- A tool for 2D protein visualization aimed at improving the comparability of protein structures through standardized 2D visualizations.☆19Updated 2 months ago
- A Unified Approach to Protein Engineering☆42Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 3 months ago
- ☆43Updated last year
- Machine learning prediction of enzyme optimum pH☆45Updated 5 months ago
- DE-STRESS is a model evaluation pipeline that aims to make protein design more reliable and accessible.☆27Updated 7 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- The DSSP building software☆47Updated 2 years ago
- ML toolset for creating TED: The Encyclopedia of Domains☆24Updated 4 months ago
- AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…☆106Updated last week
- PyDock Tutorial☆33Updated 7 years ago
- Python tool for the discovery of similar 3D structural motifs across protein structures.☆32Updated last year
- GTalign, high-performance protein structure alignment, superposition and search☆50Updated last month
- Fast indexing and search of discontinuous motifs in protein structures☆86Updated last week
- ☆30Updated 4 months ago
- scripts and facilities for in-silico mutagenesis with FoldX☆60Updated 2 months ago
- ☆46Updated 8 months ago
- Graph Network for protein-protein interface including language model features☆32Updated last year
- Efficient manipulation of protein structures in Python☆58Updated last week
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆58Updated last month
- Machine learning-driven antibody design☆60Updated 2 years ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆34Updated 3 years ago
- Bioinformatics and Cheminformatics protocols for peptide analysis☆43Updated 2 years ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆66Updated 10 months ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 5 years ago