samuelmurail / af_analysisLinks
Analysis of alphafold and colabfold results
☆32Updated 3 weeks ago
Alternatives and similar repositories for af_analysis
Users that are interested in af_analysis are comparing it to the libraries listed below
Sorting:
- ☆53Updated 6 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆116Updated last month
- Official repository for the ProteinDJ protein design pipeline☆77Updated 2 weeks ago
- A command-line interface and Python library for generating AlphaFold3 input files.☆38Updated 2 weeks ago
- PyDock Tutorial☆35Updated 7 years ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆86Updated last month
- Toolkit for alphafold3 input and output files☆96Updated last week
- Extension of ThermoMPNN for double mutant predictions☆51Updated 3 months ago
- Efficient manipulation of protein structures in Python☆61Updated 3 months ago
- Code for running BinderFlow☆55Updated last month
- Active Learning-Assisted Directed Evolution for Protein Engineering☆77Updated 2 months ago
- ☆93Updated 3 months ago
- ☆55Updated 5 months ago
- ☆43Updated 2 years ago
- Modelling of Large Protein Complexes☆39Updated 5 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- Small_molecule_binder_design_use_pseudocycles☆23Updated last year
- Fast and accurate protein domain segmentation using Invariant Point Attention☆44Updated 7 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆42Updated last year
- ☆89Updated last year
- Physics-Guided All-Atom Diffusion Model for Accurate Protein-Ligand Complex Prediction☆84Updated 3 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆100Updated last week
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆70Updated last year
- code for IDR binding paper 2025☆65Updated 11 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆68Updated last month
- Kuhlman Lab Installation of AlphaFold3☆37Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆69Updated 6 months ago
- Source code and examples for AlphaFold Unmasked☆76Updated last month
- Molecular Dynamics for Experimentalists☆65Updated 2 months ago