Alternatives and similar repositories for pymod

Users that are interested in pymod are comparing it to the libraries listed below

• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆60Updated 2 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆55Updated 2 weeks ago
• ncbi / SSDraw
  ☆84Updated last month
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆65Updated last year
• cmbi / dssp
  The DSSP building software
  ☆47Updated 2 years ago
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆52Updated 2 months ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆52Updated 2 months ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆106Updated last week
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆31Updated 2 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 6 months ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆53Updated last month
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆112Updated last year
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• mattarnoldbio / alphapickle
  ☆33Updated last year
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆23Updated last year
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆56Updated last week
• carlocamilloni / Structural-Bioinformatics
  This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…
  ☆84Updated last week
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆33Updated 7 years ago
• cmbi / hssp
  Create DSSP and HSSP files
  ☆93Updated last year
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 6 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆104Updated last month
• minmarg / gtalign_alpha
  GTalign, high-performance protein structure alignment, superposition and search
  ☆50Updated last month
• lmdu / dockey
  an integrated tool for molecular docking and virtual screening
  ☆72Updated 3 months ago
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 3 months ago
• steineggerlab / folddisco
  Fast indexing and search of discontinuous motifs in protein structures
  ☆86Updated last week
• rwmontalvao / Melodia_py
  Protein Structure Analysis
  ☆58Updated last week
• boscoh / pdbremix
  analyse PDB files, run molecular-dynamics & analyse trajectories
  ☆61Updated 7 years ago
• elaspic / elaspic2
  Predicting the effect of mutations on protein stability and protein binding affinity using pretrained neural networks and a ranking objec…
  ☆23Updated 4 years ago