Alternatives and similar repositories for hssp

Users that are interested in hssp are comparing it to the libraries listed below

• Electrostatics / apbs
  Software for biomolecular electrostatics and solvation calculations
  ☆114Updated last year
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆81Updated 3 years ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆149Updated 3 weeks ago
• delalamo / af2_conformations
  A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2
  ☆97Updated 2 years ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆123Updated 2 weeks ago
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆52Updated 3 months ago
• ShintaroMinami / PyDSSP
  A simplified implementation of DSSP algorithm for PyTorch and NumPy
  ☆94Updated 4 months ago
• HWaymentSteele / AF_Cluster
  Predict multiple protein conformations using sequence clustering and AlphaFold2.
  ☆163Updated 3 weeks ago
• cmbi / dssp
  The DSSP building software
  ☆47Updated 2 years ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆162Updated 3 months ago
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆67Updated last year
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆88Updated 4 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆120Updated 2 years ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated 4 months ago
• Kortemme-Lab / flex_ddG_tutorial
  ☆127Updated 3 years ago
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆180Updated 6 years ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆198Updated this week
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆114Updated last year
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆34Updated 7 years ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆55Updated last month
• rochoa85 / PepFun
  Bioinformatics and Cheminformatics protocols for peptide analysis
  ☆43Updated 2 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆32Updated 3 years ago
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆89Updated last year
• srnas / barnaba
  Analyse Nucleic Acids Structure and Simulations with baRNAba
  ☆46Updated last year
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆130Updated 2 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆90Updated 4 years ago
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆82Updated 8 months ago
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 7 months ago
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆110Updated last year
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆57Updated 3 years ago