GitHub repository for "Leveraging Implicit Knowledge in Neural Networks for Functional Dissection and Engineering of Proteins"
☆18Mar 31, 2019Updated 7 years ago
Alternatives and similar repositories for DeeProtein
Users that are interested in DeeProtein are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- The AiGEM software suite of Team Heidelberg 2017☆15Apr 17, 2018Updated 8 years ago
- ☆18Mar 13, 2024Updated 2 years ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 5 years ago
- Source code for fitting thermodynamic models (MoCHI), downstream analyses and to reproduce all figures in the following publication: Mapp…☆22Jul 20, 2023Updated 3 years ago
- Embeddings to Network Alignment - align biological networks between two species☆10Sep 8, 2023Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- CADEE: Computer-Aided Directed Evolution of Enzymes☆18Nov 7, 2023Updated 2 years ago
- Contrastive learning of protein representations with graph neural networks for structural and functional annotations☆11Apr 23, 2023Updated 3 years ago
- ☆19Oct 4, 2022Updated 3 years ago
- ML-optimized library design with improved fitness and diversity for protein engineering☆37Nov 5, 2025Updated 10 months ago
- Pretrained METL models with minimal dependencies☆16Sep 16, 2026Updated last week
- ☆30Apr 2, 2026Updated 5 months ago
- A C, C++, Python project focusing on Docking analysis, Source code, Blogs, Data availability, References.☆28Aug 17, 2026Updated last month
- Python Toolbox For Rosetta Silent Files Processing☆10Aug 2, 2021Updated 5 years ago
- Functions and classes for doing Gaussian process models of proteins☆11Apr 13, 2018Updated 8 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A standardized protein design benchmark for motif-scaffolding problems☆84Aug 27, 2026Updated 3 weeks ago
- ☆15Aug 16, 2025Updated last year
- This is an official implementation for "MMSite: A Multi-modal Framework for the Identification of Active Sites in Proteins".☆19Jan 4, 2025Updated last year
- High-throughput framework for running molecular simulations for METL☆22Sep 18, 2025Updated last year
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Aug 18, 2022Updated 4 years ago
- ASAP-SML: An Antibody Sequence Analysis Pipeline Using Statistical Testing and Machine Learning☆11Jul 6, 2023Updated 3 years ago
- Neural networks to model BCR affinity maturation☆19May 11, 2026Updated 4 months ago
- Generate rust command line executables from gRPC protobuf services.☆11Aug 27, 2022Updated 4 years ago
- WhatsCloud is an android app which allows you to analyze your WhatsApp chat history on the fly with only one click☆12Jul 29, 2019Updated 7 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆15Jan 10, 2020Updated 6 years ago
- ☆15May 7, 2019Updated 7 years ago
- Metagenomic binning using low-density hashing a support vector machine☆20Oct 2, 2020Updated 5 years ago
- Universal framework for physically based computational protein design☆36Sep 9, 2026Updated last week
- Amino-Acid Sequence Annotation Predictor (ASAP)☆25May 13, 2020Updated 6 years ago
- ☆15Apr 3, 2025Updated last year
- This is like Inverting Binary Tree, but instead of a Binary Tree it's a File Tree.☆12Apr 21, 2021Updated 5 years ago
- Protein Sequence Evolutionary Information Language Model☆14Oct 5, 2023Updated 2 years ago
- Display PackedPose objects, Pose objects, or PDB files within a Jupyter notebook and Google Colab☆11Aug 29, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- PyPEF – Pythonic Protein Engineering Framework☆16Sep 13, 2026Updated last week
- Official repository for discrete Walk-Jump Sampling (dWJS)☆58Dec 17, 2023Updated 2 years ago
- Guided Conditional Wasserstein GAN for De Novo Protein Design☆35Feb 23, 2021Updated 5 years ago
- Recommendation system for 3 color palettes using neural networks☆16Jan 6, 2020Updated 6 years ago
- ☆10Mar 8, 2024Updated 2 years ago
- ☆11Apr 25, 2021Updated 5 years ago
- ☆10Apr 1, 2024Updated 2 years ago