juzb / DeeProteinLinks
GitHub repository for "Leveraging Implicit Knowledge in Neural Networks for Functional Dissection and Engineering of Proteins"
☆16Updated 6 years ago
Alternatives and similar repositories for DeeProtein
Users that are interested in DeeProtein are comparing it to the libraries listed below
Sorting:
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆35Updated 4 years ago
- A convolutional neural network to predict PPI interactions☆42Updated 6 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆48Updated 9 months ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- Paratope Prediction using Deep Learning☆59Updated 2 years ago
- A Python package for extracting protein sequence features☆59Updated 2 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 7 years ago
- ProFET: Protein Feature Engineering Toolkit for Machine Learning☆57Updated 9 years ago
- Training and testing of DeepBind models.☆95Updated 9 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- deep protein solubility prediction☆36Updated 6 years ago
- Learning Protein Constitutive Motifs from Sequence Data: RBM toolbox☆20Updated 6 years ago
- Amino Acid Embedding Representation as Machine Learning Features☆19Updated 6 years ago
- ☆24Updated 3 years ago
- ☆51Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Python package and command line tool for epitope prediction☆51Updated 10 months ago
- Protein design and variant prediction using autoregressive generative models☆23Updated 2 years ago
- PSIPRED Protein Secondary Structure Predictor☆55Updated 6 months ago
- Deep Exploration Networks - Diverse Deep Generative Models for DNA, RNA and Protein Sequences☆29Updated 3 years ago
- inferring sequence-structure motifs using deep learning☆37Updated last year
- Unconstrained lattice antibody-antigen bindings generator☆109Updated 11 months ago
- MusiteDeep provides a deep-learning method for general and kinase-specific phosphorylation site prediction. It is implemented by deep lea…☆48Updated 10 months ago
- A C, C++, Python project focusing on Docking analysis, Source code, Blogs, Data availability, References.☆26Updated 2 years ago
- Protein function prediction using a variational autoencoder☆93Updated 7 years ago
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆66Updated 2 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 2 years ago
- The AiGEM software suite of Team Heidelberg 2017☆15Updated 7 years ago