Training and testing of DeepBind models.
☆100Oct 19, 2015Updated 10 years ago
Alternatives and similar repositories for DeepBind
Users that are interested in DeepBind are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CNN architecture for predicting DNA binding sites for Transcription Factors☆52Feb 6, 2019Updated 7 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Oct 7, 2020Updated 5 years ago
- RNA sequence design for a target protein sequence☆13Mar 12, 2026Updated 2 weeks ago
- A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences☆160Jan 14, 2017Updated 9 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Perform hyper-parameter tuning, training, testing and prediction with Keras☆44May 29, 2018Updated 7 years ago
- Docker image for the DeepBind method.☆16Nov 7, 2015Updated 10 years ago
- Deep Motif (ICLR16)/ Deep Motif Dashboard (PSB17): Visualizing Genomic Sequence Classifications☆46Apr 19, 2019Updated 6 years ago
- ☆20Jul 20, 2015Updated 10 years ago
- Deep neural network for predicting methylation states of single cells☆13Jan 19, 2017Updated 9 years ago
- ☆28Oct 3, 2023Updated 2 years ago
- ☆11Updated this week
- Deep Feature Interaction Maps (DFIM)☆54Apr 9, 2019Updated 6 years ago
- DeepSEA in TensorFlow☆31May 24, 2017Updated 8 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Flexible Integration of Data with Deep LEarning☆51Mar 24, 2023Updated 3 years ago
- Fold Conditioned protein design pipeline based on AF2Multimer Hallucination☆50Dec 2, 2025Updated 3 months ago
- ☆10May 16, 2020Updated 5 years ago
- A repository for neural representational learning of RNA secondary structures☆32Feb 13, 2020Updated 6 years ago
- ☆15Nov 9, 2018Updated 7 years ago
- A Package For Predicting The Disruptiveness Of Single Nucleotide Polymorphisms On Transcription Factor Binding Sites.☆34Aug 1, 2024Updated last year
- Sequential regulatory activity predictions with deep convolutional neural networks.☆466Jan 15, 2026Updated 2 months ago
- R package to detect splicing QTLs (sQTLs)☆15Feb 28, 2021Updated 5 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 2 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Pembrolizumab-like Antibody Hallucination using AlphaFold2☆16Nov 10, 2023Updated 2 years ago
- TBiNet: A deep neural network for predicting transcription factor binding sites using attention mechanism☆25Jan 14, 2021Updated 5 years ago
- "DeepDiff: Deep-learning for predicting Differential gene expression from histone modifications", Bioinformatics, Volume 34, Issue 17,☆21Dec 10, 2019Updated 6 years ago
- PEDLA: predicting enhancers with deep learning-based algorithmic framework☆16Jan 6, 2016Updated 10 years ago
- Standard set of data-loaders for training and making predictions for DNA sequence-based models.☆83Sep 3, 2024Updated last year
- Antigen-receptor Design Against Peptide-MHC Targets☆20Jan 9, 2026Updated 2 months ago
- Transcript assembly and quantification for RNA-Seq☆12Jun 3, 2019Updated 6 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆20Jul 19, 2018Updated 7 years ago
- A list of deep learning implementations in biology☆2,128Mar 4, 2026Updated 3 weeks ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆84Feb 3, 2021Updated 5 years ago
- pytorch implementation of trDesign☆45Mar 19, 2021Updated 5 years ago
- Protein representation and design under a single training scheme☆24Mar 3, 2026Updated 3 weeks ago
- Tensor Switching Networks☆12Nov 2, 2017Updated 8 years ago
- List of papers on protein binding site prediction☆11Aug 11, 2023Updated 2 years ago
- Prediction of key transcription factors in cell fate determination using enhancer networks. See full ANANSE documentation for detailed in…☆90Mar 6, 2024Updated 2 years ago
- ☆23Jul 8, 2025Updated 8 months ago