igemsoftware2017 / AiGEM_TeamHeidelberg2017Links
The AiGEM software suite of Team Heidelberg 2017
☆15Updated 7 years ago
Alternatives and similar repositories for AiGEM_TeamHeidelberg2017
Users that are interested in AiGEM_TeamHeidelberg2017 are comparing it to the libraries listed below
Sorting:
- PyTorch library of layers acting on protein representations☆118Updated 11 months ago
- De novo protein structure prediction using iteratively predicted structural constraints☆57Updated 3 years ago
- Protein function prediction using a variational autoencoder☆93Updated 7 years ago
- PDNET: A fully open-source framework for deep learning protein real-valued distances☆35Updated 4 years ago
- ☆36Updated 5 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- ☆118Updated 9 months ago
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆86Updated 3 years ago
- ThermoNet is a computational method for quantitative prediction of the impact of single-point mutations on protein thermodynamic stabilit…☆117Updated last year
- Note that current version does not include search of very large metagenome data. For some proteins, metagenome data is important. We will…☆100Updated 3 years ago
- pytoda - PaccMann PyTorch Dataset Classes. Read the docs: https://paccmann.github.io/paccmann_datasets/☆28Updated 8 months ago
- Analysis and figure code from Alley et al. 2019.☆59Updated 2 years ago
- Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies☆87Updated last year
- Paratope Prediction using Deep Learning☆59Updated 2 years ago
- DistilProtBert implementation, a distilled version of ProtBert model.☆15Updated 2 years ago
- Implementation of trRosetta and trDesign for Pytorch, made into a convenient package, for protein structure prediction and design☆82Updated 3 years ago
- ☆128Updated 4 years ago
- GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!☆54Updated 2 years ago
- AbLang: A language model for antibodies☆140Updated last year
- Repository for publicly available deep learning models developed in Rosetta community☆115Updated 3 years ago
- ☆29Updated 4 years ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆72Updated 4 years ago
- ☆51Updated 4 years ago
- mGPfusion is a Gaussian process based method for predicting stability changes upon single and multiple mutations of proteins that comple…☆15Updated 7 years ago
- ☆35Updated 2 years ago
- Reimplementation of the UniRep protein featurization model.☆107Updated 9 months ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Updated 3 months ago
- trRosetta for protein design☆179Updated 4 years ago
- Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).☆35Updated 4 years ago
- ☆58Updated 2 years ago