ehsanasgari / Deep-ProteomicsLinks
☆51Updated 5 years ago
Alternatives and similar repositories for Deep-Proteomics
Users that are interested in Deep-Proteomics are comparing it to the libraries listed below
Sorting:
- A new approach for representing biological sequences☆99Updated 11 months ago
- Modelling the Language of Life - Deep Learning Protein Sequences☆73Updated 4 years ago
- ProFET: Protein Feature Engineering Toolkit for Machine Learning☆56Updated 9 years ago
- Analysis and figure code from Alley et al. 2019.☆58Updated 2 years ago
- ☆127Updated 4 years ago
- Reimplementation of the UniRep protein featurization model.☆107Updated 11 months ago
- Protein function prediction using a variational autoencoder☆94Updated 7 years ago
- retrieve protein sequence identifiers and metadata from http://uniprot.org☆68Updated 3 years ago
- A Python framework for structural systems biology☆109Updated 4 years ago
- De novo protein structure prediction using iteratively predicted structural constraints☆60Updated 3 years ago
- ☆58Updated 8 years ago
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Updated 6 years ago
- DeepContact Software☆26Updated 7 years ago
- ☆21Updated 7 years ago
- Stochastic Sequence Propagation - A Keras Model for optimizing DNA, RNA and protein sequences based on a predictor☆48Updated last year
- Function prediction using a deep ontology-aware classifier☆84Updated 2 years ago
- ☆47Updated 8 months ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- Fast, state-of-the-art ab initio prediction of protein secondary structure in 3 and 8 classes☆46Updated 5 years ago
- End-to-end deep learning toolkit for predicting protein binding sites and motifs.☆45Updated 6 years ago
- Visually explore covariation in protein families☆38Updated 5 years ago
- PSIPRED Protein Secondary Structure Predictor☆57Updated last month
- Protein sequence classification with self-supervised pretraining☆82Updated 3 years ago
- Evolutionary velocity with protein language models☆94Updated last year
- Mutation effects predicted from sequence co-variation☆68Updated 7 years ago
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆60Updated 4 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 8 months ago
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 3 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆62Updated 5 months ago
- ERGO is a deep learing based model for predicting TCR-peptide binding.☆18Updated 3 years ago