Alternatives and similar repositories for alphafold2-docs:

Users that are interested in alphafold2-docs are comparing it to the libraries listed below

• Furman-Lab / Peptide_docking_with_AF2_and_RosettAfold
  Code and data used in https://doi.org/10.1101/2021.08.01.454656
  ☆53Updated 2 years ago
• Graylab / deepH3-distances-orientations
  ☆34Updated 3 years ago
• ProteinDesignLab / protein_seq_des
  Code for our paper "Protein sequence design with a learned potential"
  ☆79Updated last year
• ElwynWang / DeepFragLib
  ☆29Updated 4 years ago
• Tessier-Lab-UMich / Emi_Pareto_Opt_ML
  ☆20Updated 2 years ago
• ranganathanlab / bmDCA
  Fork of matteofigliuzzi/bmDCA repository for Boltzmann-machine Direct Coupling Analysis (bmDCA).
  ☆34Updated 4 years ago
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆85Updated 3 years ago
• reymond-group / MLpeptide
  Machine Learning Designs Non-Hemolytic Antimicrobial Peptides
  ☆33Updated 4 years ago
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆30Updated 5 years ago
• oxpig / ABlooper
  Tool for modelling the CDRs of antibodies
  ☆47Updated 2 years ago
• aaronkollasch / seqdesign-pytorch
  Protein design and variant prediction using autoregressive generative models
  ☆23Updated 2 years ago
• Fleishman-Lab / CUMAb
  ☆19Updated 2 weeks ago
• sarisabban / RamaNet
  Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
  ☆52Updated last month
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆114Updated 3 years ago
• dahjan / DMS_opt
  ☆68Updated 4 years ago
• kiharalab / GNN_DOVE
  Code for "Protein Docking Model Evaluation by Graph Neural Networks"
  ☆59Updated last year
• oxpig / dlab-public
  Code for the paper "DLAB - Deep learning methods for structure-basedvirtual screening of antibodies"
  ☆31Updated 2 years ago
• jproney / AF2Rank
  ☆102Updated 2 years ago
• idlutz / protein-backbone-MCTS
  ☆48Updated 10 months ago
• BioinfoMachineLearning / DIPS-Plus
  The Enhanced Database of Interacting Protein Structures for Interface Prediction
  ☆48Updated last year
• luoyunan / ECNet
  An evolutionary context-integrated deep learning framework for protein engineering
  ☆63Updated 2 years ago
• melobio / EvoPlay
  ☆72Updated last year
• aqlaboratory / hsm
  Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."
  ☆71Updated last year
• biomed-AI / PROTAC-RL
  ☆62Updated 2 years ago
• PointSite / PointSite
  PointSite: a point cloud segmentation tool for identification of protein ligand binding atoms
  ☆55Updated 2 years ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆53Updated 2 years ago
• gv20-therapeutics / antibody-in-pytorch
  Machine learning models for antibody sequences in PyTorch
  ☆39Updated 3 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆59Updated 8 months ago
• fusong-ju / ProFOLD
  A protein 3D structure prediction application
  ☆65Updated 3 years ago
• HeliXonProtein / proximal-exploration
  PyTorch implementation for our paper "Proximal Exploration for Model-guided Protein Sequence Design"
  ☆36Updated last year