inferring sequence-structure motifs using deep learning
☆40Aug 3, 2023Updated 3 years ago
Alternatives and similar repositories for iDeepS
Users that are interested in iDeepS are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 7 years ago
- iDeep: integrated prediction of RNA-protein binding sites using deep learning☆39Oct 7, 2020Updated 6 years ago
- GraphProt: modelling binding preferences of RNA-binding proteins☆21Jul 19, 2018Updated 8 years ago
- Chromatin Accessibility Prediction via Convolutional Long Short-Term Memory Networks with k-mer Embedding☆15Nov 5, 2018Updated 7 years ago
- Explicit Decomposition with Neighborhoods python version☆45Jun 17, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- inferring RBP binding sites and motifs using local and global CNNs☆20Sep 29, 2019Updated 7 years ago
- CNN architecture for predicting DNA binding sites for Transcription Factors☆53Feb 6, 2019Updated 7 years ago
- This repository contains all DeepCLIP Python code☆11May 30, 2024Updated 2 years ago
- DLPRB: A Deep Learning Approach for Predicting Protein-RNA Binding☆13Nov 29, 2018Updated 7 years ago
- A hybrid deep convolutional neural network for predicting chromatin accessibility☆25Apr 10, 2019Updated 7 years ago
- Base-pair resolution detection of transcription factor binding site by deep deconvolutional network☆11Sep 12, 2017Updated 9 years ago
- Integrative orthogonal non-negative matrix factorization☆32Sep 29, 2019Updated 7 years ago
- ☆15Sep 14, 2021Updated 5 years ago
- ☆16Mar 3, 2018Updated 8 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Oct 15, 2025Updated last year
- Modelling RBP binding preferences to predict RPB binding sites☆11Mar 4, 2021Updated 5 years ago
- Jax code for functional genomics ML☆14Mar 5, 2025Updated last year
- Coda: a convolutional denoising algorithm for genome-wide ChIP-seq data☆34Jul 14, 2017Updated 9 years ago
- This is a short response to the 2018 RFI on NIH Strategic Plan for Data Science☆16Apr 4, 2018Updated 8 years ago
- DSDE Deep Learning Club☆40Mar 28, 2019Updated 7 years ago
- An attempted survey of the current state of Computational Phenotyping, i.e. the use of deep learning for extracting insight from large El…