CapsNet for Protein Post-translational Modification site prediction.
☆25Nov 20, 2019Updated 6 years ago
Alternatives and similar repositories for CapsNet_PTM
Users that are interested in CapsNet_PTM are comparing it to the libraries listed below
Sorting:
- MusiteDeep provides a deep-learning method for general and kinase-specific phosphorylation site prediction. It is implemented by deep lea…☆48Aug 5, 2025Updated 6 months ago
- This repository contains the stand-alone tool for MusiteDeep server☆35Dec 5, 2020Updated 5 years ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- Predicting or pretending: artificial intelligence for protein-ligand interactions lack of sufficiently large and unbiased datasets☆12Feb 21, 2021Updated 5 years ago
- Deep Boosted Molecular Dynamics☆13Aug 27, 2024Updated last year
- Optimization of binding affinities in chemical space for drug discovery☆36Jan 31, 2023Updated 3 years ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Nov 22, 2016Updated 9 years ago
- inferring sequence-structure motifs using deep learning☆40Aug 3, 2023Updated 2 years ago
- AdaptivePELE is a Python package aimed at enhancing the sampling of molecular simulations☆16Oct 10, 2023Updated 2 years ago
- Statistical Analysis of Docking Results and Scoring functions☆21Feb 22, 2026Updated last week
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆22Nov 6, 2024Updated last year
- ☆19Jan 24, 2023Updated 3 years ago
- Pytorch implementation of Pocket2Drug: a generative deep learning model to predict binding drugs for ligand-binding sites.☆21May 19, 2022Updated 3 years ago
- MOlecule fRagmenTAtion fRamework☆27Feb 20, 2026Updated last week
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago
- Mol2vec notebooks for use with Binder service☆29Mar 24, 2018Updated 7 years ago
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆10Jan 20, 2022Updated 4 years ago
- A library to align rigid molecules and clusters☆12Feb 18, 2026Updated last week
- Chemical Similarity Enrichment analysis of metabolomics datasets☆30Jul 19, 2024Updated last year
- BAPA preprocessing scripts and model☆25Jul 22, 2021Updated 4 years ago
- MDMS: Molecular Dynamics Made Simple; Python program facilitating performing Molecular Dynamics simulations of proteins☆26Oct 29, 2019Updated 6 years ago
- Python tutorial for estimating and clustering free energy landscapes with InfleCS.☆31May 6, 2022Updated 3 years ago
- Graph Inference on MoLEcular Topology☆26Mar 25, 2023Updated 2 years ago
- PyProphet: Semi-supervised learning and scoring of OpenSWATH results.☆30Updated this week
- DeepGS: Deep Representation Learning of Graphs and Sequences for Drug-Target Binding Affinity Prediction (ECAI 2020)☆26Oct 22, 2020Updated 5 years ago
- 💊 Molecular informatics toolkit with integration of bioinformatics and cheminformatics tools for drug discovery☆37Sep 18, 2024Updated last year
- protein embedding project☆12May 3, 2018Updated 7 years ago
- This project is a Graphical User Interface frontend for GlycoGenius, a python program that aims to be an all-in-one solution for data ana…☆15Jan 25, 2026Updated last month
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆32Mar 21, 2019Updated 6 years ago
- Spring 2021 Short Course materials☆12Dec 2, 2024Updated last year
- Web scraper for UniProt and iPTMnet database☆10Jul 12, 2018Updated 7 years ago
- ☆37Mar 21, 2021Updated 4 years ago
- An experimental deep learning & genotype network-based system for predicting new influenza protein sequences.☆36Aug 23, 2023Updated 2 years ago
- maxsmi: a guide to SMILES augmentation. Find the optimal SMILES augmentation for accurate molecular prediction.☆34Feb 22, 2024Updated 2 years ago
- Given an RDKit molecule that does not sanitise, correct it until it does☆44Apr 5, 2024Updated last year
- ☆12Nov 26, 2023Updated 2 years ago
- Fragment Graphical Variational AutoEncoding for Screening and Generating Molecules☆14Nov 21, 2022Updated 3 years ago
- geoRge: a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics☆11Sep 17, 2021Updated 4 years ago
- A python package for spectral deconvolution of UV-Vis waveforms☆14Jul 1, 2021Updated 4 years ago