CapsNet for Protein Post-translational Modification site prediction.
☆25Nov 20, 2019Updated 6 years ago
Alternatives and similar repositories for CapsNet_PTM
Users that are interested in CapsNet_PTM are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- MusiteDeep provides a deep-learning method for general and kinase-specific phosphorylation site prediction. It is implemented by deep lea…☆49Aug 5, 2025Updated 8 months ago
- iDeepV: predicting RBP binding sites using vector representation learned from sequences with a CNN.☆10Jul 16, 2019Updated 6 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆36Dec 5, 2020Updated 5 years ago
- Statistical Analysis of Docking Results and Scoring functions☆21Feb 22, 2026Updated 2 months ago
- ☆19Jan 24, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Predicting or pretending: artificial intelligence for protein-ligand interactions lack of sufficiently large and unbiased datasets☆12Feb 21, 2021Updated 5 years ago
- Deep Boosted Molecular Dynamics☆13Aug 27, 2024Updated last year
- ☆12Dec 15, 2020Updated 5 years ago
- Analysis pipeline for our circSC manuscript☆14May 18, 2022Updated 3 years ago
- A bash script for an automated Rosetta Abinitio folding simulation on an HPC☆11Aug 29, 2020Updated 5 years ago
- scGNN (single cell graph neural networks) for single cell clustering and imputation using graph neural networks☆10Aug 4, 2020Updated 5 years ago
- This is a quickly written utility that generates a binary tree containing a summation of the nodes below it and a verifier hash. Copyrigh…☆23Nov 17, 2025Updated 5 months ago
- ☆16Jun 22, 2020Updated 5 years ago
- Optimization of binding affinities in chemical space for drug discovery☆36Jan 31, 2023Updated 3 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- FS-GNNTR: Few-shot Learning with Transformers via Graph Embeddings for Molecular Property Prediction☆19Mar 21, 2025Updated last year
- A simplified drug discovery pipeline -- generating SMILE molecular with AlphaSMILES, predicting protein structure with AlphaFold, and che…☆18Aug 13, 2021Updated 4 years ago
- We assembled a compendium dataset of mass-spectrometry-based proteomics data of 2002 primary tumors from 14 cancer types and 17 studies☆18Feb 4, 2022Updated 4 years ago
- For training very deep networks☆10Jun 12, 2017Updated 8 years ago
- Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure☆52Mar 7, 2025Updated last year
- AdaptivePELE is a Python package aimed at enhancing the sampling of molecular simulations☆16Oct 10, 2023Updated 2 years ago
- The bioplib library☆12Jul 25, 2023Updated 2 years ago
- Imitation learning from multiple experts☆13Aug 29, 2022Updated 3 years ago
- Hands-on with popular deep learning datasets and tasks☆13Apr 4, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Nov 22, 2016Updated 9 years ago
- Code accompanying the paper "Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively…☆12Aug 26, 2021Updated 4 years ago
- Mol2vec notebooks for use with Binder service☆29Mar 24, 2018Updated 8 years ago
- Leveraging Local and Global Patterns for Self-Attention Networks☆12Jun 3, 2019Updated 6 years ago
- De novo molecular design with deep molecular generative models for protein-protein interaction(PPI) inhibitors☆22Nov 6, 2024Updated last year
- ☆18Mar 16, 2019Updated 7 years ago
- Cost-effective and scalable LiDAR simulation by factoring the real world.☆12Dec 8, 2025Updated 4 months ago
- A collection of Python modules equivalent to R ReQTL Toolkit aims to identify the association between expressed SNVs with their gene expr…☆10Jan 20, 2022Updated 4 years ago
- Neural networks for amino acid sequences☆22Feb 26, 2018Updated 8 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- MDMS: Molecular Dynamics Made Simple; Python program facilitating performing Molecular Dynamics simulations of proteins☆27Oct 29, 2019Updated 6 years ago
- ☆10May 16, 2020Updated 5 years ago
- Data repository for pkasolver☆13Mar 28, 2022Updated 4 years ago
- ☆37Mar 21, 2021Updated 5 years ago
- A plugin for repo2docker that outputs a directory with a shell-script and required files☆13Jun 24, 2025Updated 10 months ago
- This repository gathers the SchNet4AIM code along with some instructions and readme files.☆15Mar 13, 2024Updated 2 years ago
- GitHub Action to automatically generate md documentation from bash script with shdoc☆10Jan 2, 2021Updated 5 years ago