junjunlab / GetGeneLengthLinks
Extract gene length based on featureCount calculation gene nonredundant exon length method.
☆17Updated 3 years ago
Alternatives and similar repositories for GetGeneLength
Users that are interested in GetGeneLength are comparing it to the libraries listed below
Sorting:
- extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.☆10Updated 3 years ago
- An elegant package to visualize gene structures☆79Updated 2 years ago
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆61Updated last year
- A pipeline to process m6A-seq data and down stream analysis.☆45Updated 5 years ago
- Analysis pipeline for ATAC-seq Data☆61Updated 3 years ago
- Basic workflow for ATAC-seq analysis☆82Updated last year
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆11Updated 10 months ago
- release version☆54Updated 3 years ago
- Analysis pipeline for ATAC-seq data☆70Updated last year
- Pipeline of time-ordered gene coexpression network (TO-GCN) construction from three-dimensional (gene expression, condition, and time) da…☆50Updated 2 years ago
- ☆84Updated 11 months ago
- Links to ATAC-seq analysis tools☆69Updated 3 years ago
- ☆114Updated 5 months ago
- ☆109Updated last year
- SNV calling from single cell sequencing☆105Updated 9 months ago
- Analysis of Paired-Tag datasets☆42Updated last year
- SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.☆78Updated last year
- Tutorial Website☆59Updated 4 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 5 years ago
- Generate IGV style locus tracks from bigWig files in R☆167Updated 9 months ago
- ☆86Updated 4 years ago
- An R package to visualize bigwigs.☆31Updated 3 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆51Updated last year
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆104Updated 2 weeks ago
- Estimate locus specific human LINE-1 expression.☆36Updated 2 years ago
- A bioconductor package with minimalist design for drawing elegant tracks or lollipop plot☆72Updated 2 months ago
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆90Updated 2 years ago
- A collection of tools to process single-cell omics datasets.☆48Updated 2 months ago
- From RNA-seq raw reads to enriched pathways by DEGs☆32Updated last year