junjunlab / GetGeneLength
Extract gene length based on featureCount calculation gene nonredundant exon length method.
☆17Updated 3 years ago
Alternatives and similar repositories for GetGeneLength:
Users that are interested in GetGeneLength are comparing it to the libraries listed below
- An elegant package to visualize gene structures☆76Updated 2 years ago
- An R package to visualize bigwigs.☆29Updated 2 years ago
- extract gene TSS/TES site form gencode/ensembl/gencode database GTF file and export bed format file.☆10Updated 3 years ago
- Integrating Ribo-SEQ Upstream and Downstream Analysis☆11Updated 6 months ago
- A pipeline to process m6A-seq data and down stream analysis.☆44Updated 4 years ago
- ☆78Updated 8 months ago
- Analysis pipeline for ATAC-seq Data☆60Updated 3 years ago
- Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022☆37Updated last year
- Pan-cancer mycobiome atlas☆25Updated 2 years ago
- Analysis pipeline for ATAC-seq data☆59Updated last year
- Dynamics analysis of Alternative PolyAdenylation from RNA-seq☆58Updated last year
- Visualizing SingleCell data Using GGplot2☆32Updated 7 months ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆47Updated 9 months ago
- release version☆51Updated 2 years ago
- ☆10Updated 7 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆50Updated 5 years ago
- ☆105Updated 2 months ago
- Extract Sequence from Genome According to Annotation File☆33Updated 3 weeks ago
- Basic workflow for ATAC-seq analysis☆77Updated last year
- ☆66Updated 2 years ago
- Tutorial Website☆59Updated 4 years ago
- An integrated platform for modeling gene-regulatory dynamics and networks☆31Updated 9 months ago
- An open source and flexible pipeline to analysis high-throughput DNBelab C Series single-cell RNA datasets☆90Updated 3 weeks ago
- ☆32Updated 10 months ago
- A R package for advanced single cell data viz☆66Updated last year
- Pipeline for Cut&Tag analysis☆21Updated 3 weeks ago
- Install GISTIC2 by one line code; GISTIC2 docker image☆41Updated 2 years ago
- Analysis of Paired-Tag datasets☆41Updated last year
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆84Updated 2 years ago
- Single-cell multi-omics analysis reveals regulatory programs in clear cell renal cell carcinoma☆77Updated 6 months ago