Machine learning-based integration model with elegant performance
☆209Sep 23, 2025Updated last year
Alternatives and similar repositories for Mime
Users that are interested in Mime are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Machine learning-based integrative analysis develops an immune-derived lncRNA signature for improving clinical outcomes in colorectal can…☆137May 30, 2025Updated last year
- IOBR is an R package to perform comprehensive analysis of tumor microenvironment and signatures for immuno-oncology. https://iobr.github.…☆297Jul 23, 2026Updated 3 months ago
- 📦R包:Make TCGA download and prepare easy!☆156Sep 19, 2025Updated last year
- Integrate Analysis and Visualization for Bioinformatic Enrichment Analyzer☆82Dec 16, 2023Updated 2 years ago
- An implement R package to visualize GSEA results☆236Jul 14, 2026Updated 3 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Scissor package☆279May 10, 2024Updated 2 years ago
- Identification and Validation Robust Prognostic Biomarkers and Signatures in Solid Tumors☆65Apr 1, 2025Updated last year
- The integration of single cell rank-based gene set enrichment analysis☆158Jan 14, 2026Updated 9 months ago
- Multi-Omics integration and VIsualization in Cancer Subtyping☆150Jul 19, 2021Updated 5 years ago
- ☆422Sep 24, 2026Updated last month
- 🐯 tigeR: Tumor Immunotherapy Gene Expression Data Analysis R package☆53Jan 21, 2026Updated 9 months ago
- Useful functions to make your scRNA-seq plot more cool!☆406Apr 18, 2026Updated 6 months ago
- SIDISH: Semi-supervised Iterative Deep Learning for Identifying Single-cell High-risk Populations☆26Jul 30, 2026Updated 3 months ago
- Quantifying metabolism activity at the single-cell resolution☆201Aug 20, 2026Updated 2 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A Fully Bayesian Inference of Tumor Microenvironment composition and gene expression☆254Apr 3, 2026Updated 6 months ago
- An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.☆683Mar 11, 2026Updated 7 months ago
- A number of functions were generated to perform pan-cancer DEG analysis, correlation analysis between gene expression and TMB, MSI, TIME,…☆123Mar 28, 2025Updated last year
- The R package scCODE, a platform for data-specific DE gene detection for scRNA-seq data☆15Nov 9, 2023Updated 2 years ago
- R/MATLAB package to perform virtual knockout experiments on single-cell gene regulatory networks.☆308Oct 8, 2026Updated 3 weeks ago
- An R package for single-cell and spatial omics analysis, integration, interpretation, and visualization.☆318Updated this week
- Methods to discover gene programs on single-cell data☆212Oct 12, 2026Updated 2 weeks ago
- CytoTRACE 2 is an interpretable AI method for predicting cellular potency and absolute developmental potential from scRNA-seq data.☆271Jul 8, 2026Updated 3 months ago
- Calibrated clustering with artificial variables to avoid over-clustering in single-cell RNA-sequencing☆21Nov 18, 2025Updated 11 months ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Codes for the scPLC project☆73Dec 2, 2022Updated 3 years ago
- A R package for advanced single cell data viz☆74Aug 29, 2025Updated last year
- plots function for array☆105Jun 13, 2024Updated 2 years ago
- SCIPAC (Single- Cell and bulk data-based Identifier for Phenotype Associated Cells) is a computational method that identifies cells in si…☆17Jun 30, 2024Updated 2 years ago
- A computational method to rank and infer drug-responsive cell population towards in-silico drug perturbation using a target-perturbed gen…☆77Oct 16, 2025Updated last year
- A python library for multi omics included bulk, single cell and spatial RNA-seq analysis.☆1,392Updated this week
- The goal of `ggVolcano` is to help users make a beautiful volcano map more easily, including general volcano plot(`ggvolcano`), gradient …☆97Mar 27, 2023Updated 3 years ago
- 单细胞分析的中文pipeline☆312May 21, 2026Updated 5 months ago
- Beyondcell is a computational methodology for identifying tumour cell subpopulations with distinct drug responses in single-cell RNA-seq …☆63Sep 17, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Robust identification of perturbed cell types in single-cell RNA-seq data☆44Nov 10, 2025Updated 11 months ago
- ☆33Feb 26, 2025Updated last year
- ☆37Jan 23, 2024Updated 2 years ago
- A High Effect Marker Gene Search Tool for Single-cell RNA-seq Analysis☆34Sep 14, 2024Updated 2 years ago
- An R package for drug response prediction and drug-gene association prediction.☆36Jun 13, 2026Updated 4 months ago
- Use batch balanced KNN (BBKNN) in R☆14Sep 9, 2025Updated last year
- Deconvolution of spatial transcriptomics at single-cell resolution☆23Mar 25, 2026Updated 7 months ago