jumphone / BioinformaticsLinks
Bioinformatics Workflows
☆19Updated 5 years ago
Alternatives and similar repositories for Bioinformatics
Users that are interested in Bioinformatics are comparing it to the libraries listed below
Sorting:
- ☆120Updated 2 years ago
- Analysis Workflow for Assay for Transposase-Accessible Chromatin using sequencing (ATAC-Seq)☆75Updated 2 years ago
- Pileup biallelic SNPs from single-cell and bulk RNA-seq data☆83Updated 3 years ago
- Analysis pipeline for ATAC-seq Data☆62Updated 4 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Updated 5 years ago
- Code and additional processed data for manuscript "Tumor and Microenvironment Evolution during Immunotherapy with Nivolumab"; see for man…☆54Updated 7 years ago
- A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data☆81Updated last month
- ATAC-seq snakemake pipeline☆88Updated 5 years ago
- Integrative pathway enrichment analysis of multivariate omics data☆120Updated 6 months ago
- Pipelines for the analysis of 10x single-cell RNA-sequencing data☆57Updated 2 years ago
- ☆63Updated 5 years ago
- Repo for Physalia course Analysis of Single Cell RNA-Seq data☆33Updated 6 years ago
- microRNA profiling pipeline☆81Updated 4 years ago
- A quickstart tool for AmpliconArchitect. Enables all steps (alignment, CNV calling, seed interval detection) prior to running AmpliconArc…☆77Updated last week
- Integrative analysis pipeline for pooled CRISPR functional genetic screens☆32Updated 2 years ago
- 2017_2018 single cell RNA sequencing Workshop UCD_UCB_UCSF☆37Updated 7 years ago
- A single cell RNA-seq workflow, including highly variable gene analysis, cell type assignment and differential expression analysis.☆105Updated 3 years ago
- GLASS consortium☆42Updated 5 years ago
- epigenome analysis to rank transcription factors☆33Updated 3 years ago
- R data package for pre-compiled somatic mutations from TCGA cohorts and CCLE☆99Updated last year
- In-silico method written in Python and R to determine HLA genotypes of a sample. seq2HLA takes standard RNA-Seq sequence reads in fastq f…☆50Updated 6 months ago
- Immunology-related bioinformatics data and tools☆76Updated last year
- AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-…☆106Updated 3 years ago
- Repository for Cibersortx☆62Updated 4 years ago
- RNA-seq data analysis practical☆62Updated 11 years ago
- Scripts for paper entitled "Limits in the detection of m6A changes using MeRIP/m6A-seq☆51Updated 6 years ago
- ROSE: RANK ORDERING OF SUPER-ENHANCERS☆63Updated 2 months ago
- A pipeline to process m6A-seq data and down stream analysis.☆44Updated 5 years ago
- Mouse cell atlas☆61Updated 5 years ago
- Links to ATAC-seq analysis tools☆77Updated 4 years ago