Target exome sequencing analysis for NYU NGS580 gene panel
☆10Sep 29, 2021Updated 5 years ago
Alternatives and similar repositories for NGS580-nf
Users that are interested in NGS580-nf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Joint calling of gVCF, following GATK4 Best Practices☆12Apr 3, 2019Updated 7 years ago
- Genomic data interpretation and visualization Workshop☆22May 8, 2026Updated 5 months ago
- CNV Rapid Aberration Detection And Reporting☆13Mar 2, 2021Updated 5 years ago
- A modern Python library for BaseSpace Clarity LIMS.☆15Oct 23, 2025Updated 11 months ago
- R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework☆42Oct 5, 2026Updated 2 weeks ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm…☆20Jul 6, 2026Updated 3 months ago
- Web-based database system for flow cell management (incl. REST API)☆16Mar 7, 2024Updated 2 years ago
- Modern ggplot2 visualizations for GWAS summary statistics☆36Updated this week
- A collection of scripts used to recreate files and graphs used in the MMRF CoMMpass analysis.☆26Nov 23, 2025Updated 10 months ago
- Inferring admixture proportions from NGS data☆13Updated this week
- Pan gGnome Viewer☆10Sep 24, 2026Updated 3 weeks ago
- Filters for Next Generation Sequencing☆13Oct 31, 2024Updated last year
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Drop a PDF onto a page, get markdown back. Everything runs locally in the browser, no uploads, no server.☆23Jul 22, 2026Updated 2 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- NSU bioinformatics Python course☆14Sep 24, 2024Updated 2 years ago
- Lesson for the shell for genomics☆11Jan 12, 2021Updated 5 years ago
- A community menagarie of automated variant validations using bcbio and the Common Workflow Language☆21Nov 3, 2021Updated 4 years ago
- Discovering copy number signatures from TCGA and new cohorts.☆10Feb 3, 2023Updated 3 years ago
- ☆13Mar 17, 2023Updated 3 years ago
- A Reproducible Untargeted Metabolomics Data Processing Pipeline☆11Mar 18, 2021Updated 5 years ago
- ☆43Feb 9, 2024Updated 2 years ago
- Repository for the Sequoia phylogeny reconstruction pipeline☆11Feb 17, 2026Updated 8 months ago
- Utility functions to extend and optimize GenomicRanges functionality.☆10Jul 9, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- convert alignment bam to pairwise alignment or multiple sequence alignment (msa) at genome specific region☆13May 21, 2024Updated 2 years ago
- Program for estimating admixture proportions and doing principal component analysis of a single NGS sample☆12Sep 15, 2026Updated last month
- SDRF official validator and converts SDRF to pipeline configuration files☆37Updated this week
- 🧲 Multi-step adaptive estimation for reducing false positive selection in sparse regressions☆13Jul 21, 2024Updated 2 years ago
- Student website repo for 2015/2016 Canadian Bioinformatics Workshops☆36Apr 5, 2023Updated 3 years ago
- LIME-like explanations with interpretable features based on Ceteris Paribus curves. Now on CRAN.☆14Sep 19, 2021Updated 5 years ago
- Personal Cancer Genome Reporter (PCGR)☆284Updated this week
- Personalized cancer epitope discovery and peptide vaccine prediction pipeline☆30Nov 14, 2017Updated 8 years ago
- The website for bioboxes☆11Jun 9, 2017Updated 9 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ATAC-seq lab for BIOINF525☆10Mar 31, 2016Updated 10 years ago
- Scripts and files used in the generation of the COLO829 somatic SV truthset.☆15Apr 9, 2022Updated 4 years ago
- Python deployment tool for bespoke image curation projects, oriented toward scientific projects. Please cite https://academic.oup.com/gig…☆14Aug 6, 2022Updated 4 years ago
- CITEViz: Replicating the Interactive Flow Cytometry Workflow in CITE-Seq☆11Jun 6, 2024Updated 2 years ago
- Workshop content for http://dib-training.readthedocs.org/en/pub/2016-01-13-adv-beg-shell.html☆14Feb 23, 2018Updated 8 years ago
- Single Cell Genomes with Allele Specificity☆14Oct 6, 2026Updated 2 weeks ago
- Reticulate wrapper for hyperopt☆11Jan 14, 2020Updated 6 years ago