Alternatives and similar repositories for Python4Bioinformatics

Users that are interested in Python4Bioinformatics are comparing it to the libraries listed below

• shenwei356 / bio_scripts
  Practical, reusable scripts for bioinformatics
  ☆103Updated 6 years ago
• bpucker / APPLS
  Applied Python Programming for Life Scientists
  ☆25Updated 4 years ago
• GenomicsAotearoa / RNA-seq-workshop
  ☆19Updated last year
• kyclark / bioinformatics_primer
  Bioinformatics with Unix, bash, Make, Python, and parallel
  ☆22Updated 5 years ago
• tanghaibao / bio-pipeline
  My collection of light bioinformatics analysis pipelines for specific tasks
  ☆75Updated last year
• YaoLab-Bioinfo / shinyCircos-V2.0
  an R/Shiny application for interactive creation of Circos plot
  ☆48Updated 2 years ago
• biostars / biostar-handbook
  Issue tracker for the Biostar Handbook
  ☆63Updated 3 years ago
• dputhier / pygtftk
  A python package and a set of shell commands to handle GTF files
  ☆49Updated last year
• nf-core / rnasplice
  rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
  ☆56Updated 2 months ago
• TRON-Bioinformatics / covigator-ngs-pipeline
  A Nextflow pipeline for NGS variant calling on SARS-CoV-2. From FASTQ files to normalized and annotated VCF files from GATK, BCFtools, Lo…
  ☆19Updated last year
• bpucker / MolecularMethodsInGenomeResearch
  practical course about lab methods in genome research
  ☆23Updated 3 years ago
• HadrienG / tutorials
  Various bioinformatics tutorials
  ☆61Updated last year
• griffithlab / rnaseq_tutorial_wiki
  The wiki repo, with pull request enabled, for the rnaseq_tutorial
  ☆26Updated 5 years ago
• lpantano / seqcluster
  small RNA analysis from NGS data
  ☆37Updated 11 months ago
• zavolanlab / zarp
  The Zavolab Automated RNA-seq Pipeline
  ☆35Updated last month
• sestaton / HMMER2GO
  Annotate DNA sequences for Gene Ontology terms
  ☆41Updated 3 years ago
• jsh58 / NGmerge
  Merging paired-end reads and removing adapters
  ☆46Updated 5 months ago
• sgivan / gb2ptt
  Convert a Genbank flat file to an NCBI ptt file
  ☆17Updated 2 years ago
• cccnrc / plot-VCF
  visual analysis of your VCF files
  ☆36Updated 2 years ago
• BackofenLab / IntaRNA
  Efficient target prediction incorporating accessibility of interaction sites
  ☆48Updated last month
• schatzlab / appliedgenomics2018
  Materials for Spring 2018 Applied Genomics Course
  ☆79Updated 6 years ago
• guokai8 / bioAnno
  Build Annotation package by using information from KEGG, NCBI, Ensembl
  ☆15Updated 2 years ago
• MikeAxtell / ShortStack
  ShortStack: Comprehensive annotation and quantification of small RNA genes
  ☆93Updated 3 months ago
• mourisl / Rcorrector
  Error correction for Illumina RNA-seq reads
  ☆67Updated last year
• LabTranslationalArchitectomics / riboWaltz
  optimization of ribosome P-site positioning in ribosome profiling data
  ☆52Updated 6 months ago
• frankMusacchia / Annocript
  Annocript is a pipeline for the annotation of de-novo generated transcriptomes. It executes BLAST analysis with UniProt, NCBI Conserved …
  ☆56Updated 5 years ago
• mritchielab / long_read_tools
  A catalogue of available long read sequencing data analysis tools
  ☆79Updated this week
• stevekm / Bioinformatics
  Bioinformatics analysis scripts, workflows, general code examples
  ☆53Updated 4 years ago
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• hbctraining / Intro-to-rnaseq-hpc-salmon
  ☆50Updated 4 years ago