Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
☆62Jul 9, 2025Updated 11 months ago
Alternatives and similar repositories for Graphinity
Users that are interested in Graphinity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Aug 26, 2025Updated 10 months ago
- Versatile human antibody sequence design☆22Apr 12, 2026Updated 2 months ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆45Jun 17, 2024Updated 2 years ago
- Improved antibody structure-based design using inverse folding☆166Dec 9, 2025Updated 6 months ago
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 9 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Fitness landscapes for antibodies☆181May 12, 2026Updated last month
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆27Feb 23, 2026Updated 4 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- ParaAntiProt: Paratope Prediction Using Antibody and Protein Language Models☆10Jul 16, 2024Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆421Sep 3, 2023Updated 2 years ago
- Unconstrained lattice antibody-antigen bindings generator☆114May 23, 2026Updated last month
- Predict the structure of immune receptor proteins☆182Nov 11, 2025Updated 7 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆79Mar 18, 2025Updated last year
- Tokenizing Loops of Antibodies☆35Nov 23, 2025Updated 7 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆27Apr 22, 2024Updated 2 years ago
- ☆12Mar 14, 2024Updated 2 years ago
- Antibody-specific masked language model☆79Mar 5, 2026Updated 3 months ago
- ☆139Aug 8, 2024Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Sep 18, 2025Updated 9 months ago
- Benchmark for Biophysical Sequence Optimization Algorithms☆23Apr 15, 2026Updated 2 months ago
- ☆24Nov 28, 2025Updated 7 months ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆45Nov 8, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 11 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆101Jun 11, 2025Updated last year
- ☆18Oct 5, 2024Updated last year
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆16Oct 17, 2024Updated last year
- ☆32Jun 16, 2025Updated last year
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆55Nov 14, 2023Updated 2 years ago
- ☆39Oct 22, 2024Updated last year
- An antibody-specific language model focusing on NGL prediction☆28Mar 8, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Efficient evolution from protein language models