Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity
☆57Jul 9, 2025Updated 9 months ago
Alternatives and similar repositories for Graphinity
Users that are interested in Graphinity are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆28Aug 26, 2025Updated 8 months ago
- Versatile human antibody sequence design☆22Apr 12, 2026Updated 2 weeks ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆43Jun 17, 2024Updated last year
- Improved antibody structure-based design using inverse folding☆159Dec 9, 2025Updated 4 months ago
- Prediction of Antibody CDR and protein loop flexibility☆17Sep 17, 2025Updated 7 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Fitness landscapes for antibodies☆168Apr 20, 2026Updated last week
- DeepViscosity is a deep learning ANN model developed to predict high concentrated monoclonal antibody viscosity classes (Low <= 20cps, Hi…☆26Feb 23, 2026Updated 2 months ago
- The Patent and Literature Antibody Database (PLAbDab): an evolving reference set of functionally diverse, literature-annotated antibody s…☆31Jul 8, 2024Updated last year
- ParaAntiProt: Paratope Prediction Using Antibody and Protein Language Models☆10Jul 16, 2024Updated last year
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆414Sep 3, 2023Updated 2 years ago
- Unconstrained lattice antibody-antigen bindings generator☆112Nov 16, 2025Updated 5 months ago
- Predict the structure of immune receptor proteins☆181Nov 11, 2025Updated 5 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆75Mar 18, 2025Updated last year
- ☆26Apr 22, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Tokenizing Loops of Antibodies☆34Nov 23, 2025Updated 5 months ago
- Antibody-specific masked language model☆73Mar 5, 2026Updated last month
- ☆136Aug 8, 2024Updated last year
- Code for ICML 2023 paper "Reprogramming Pretrained Language Models for Antibody Sequence Infilling"☆24Sep 18, 2025Updated 7 months ago
- Benchmark for Biophysical Sequence Optimization Algorithms☆21Apr 15, 2026Updated 2 weeks ago
- ☆23Nov 28, 2025Updated 5 months ago
- The official implementation of the AAAI'24 paper Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer.☆12Dec 28, 2023Updated 2 years ago
- ANTIPASTI (ANTIbody Predictor of Affinity from STructural Information) is a Deep Learning model that predicts the binding affinity of ant…☆42Nov 8, 2024Updated last year
- Inpainting protein sequence and structure☆12Nov 10, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆13Jul 9, 2025Updated 9 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆93Jun 11, 2025Updated 10 months ago
- ☆14Oct 5, 2024Updated last year
- Code for NeurIPS 2024 paper "A SARS-CoV-2 Interaction Dataset and VHH Sequence Corpus for Antibody Language Models"☆15Oct 17, 2024Updated last year
- ☆27Jun 16, 2025Updated 10 months ago
- PyTorch code for KDD 2023 paper "Pre-training Antibody Language Models for Antigen-Specific Computational Antibody Design"☆55Nov 14, 2023Updated 2 years ago
- An antibody-specific language model focusing on NGL prediction☆27Mar 8, 2025Updated last year
- ☆39Oct 22, 2024Updated last year
- Efficient evolution from protein language models☆223Aug 26, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- open source repository☆148Nov 30, 2023Updated 2 years ago
- RAG-ESM is a retrieval-augmented framework that allows to condition pretrained ESM2 protein language models on homologous sequences☆27Aug 21, 2025Updated 8 months ago
- Code for 'On Pre-trained Language Models For Antibody'☆32Feb 1, 2023Updated 3 years ago
- An antibody-specific language model focusing on NGL prediction☆38Aug 22, 2024Updated last year
- Antibody-Antigen Docking and Affinity Benchmark☆78Nov 17, 2020Updated 5 years ago
- ☆57Sep 12, 2025Updated 7 months ago
- Official repository for DiffPepBuilder and DiffPepDock tools☆125Oct 24, 2025Updated 6 months ago