Alternatives and similar repositories for ECNet

Users that are interested in ECNet are comparing it to the libraries listed below

• OATML-Markslab / ProteinNPT
  Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"
  ☆113Updated 2 months ago
• TencentAI4S / IgGM
  [ICLR2025] Official Implementation of IgGM: A Generative Model for Functional Antibody and Nanobody Design
  ☆74Updated 3 weeks ago
• WillHua127 / EnzymeFlow
  Official repository of EnzymeFlow
  ☆92Updated 5 months ago
• chloechsu / combining-evolutionary-and-assay-labelled-data
  ☆62Updated 3 years ago
• jproney / AF2Rank
  ☆108Updated 2 years ago
• biomed-AI / GraphSite
  GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures
  ☆59Updated 10 months ago
• OpenProteinAI / PoET
  Inference code for PoET: A generative model of protein families as sequences-of-sequences
  ☆72Updated last year
• J-SNACKKB / FLIP
  A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design
  ☆100Updated 8 months ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆149Updated 8 months ago
• leandroradusky / pyfoldx
  pyFoldX: python bindings for FoldX.
  ☆46Updated 3 years ago
• wengong-jin / abdockgen
  ☆106Updated 2 years ago
• Liuxg16 / GeoPPI
  ☆86Updated 2 years ago
• zhanghaicang / carbonmatrix_public
  ☆112Updated last month
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆59Updated 11 months ago
• piercelab / antibody_benchmark
  Antibody-Antigen Docking and Affinity Benchmark
  ☆71Updated 4 years ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆59Updated last year
• samgoldman97 / enzyme-datasets
  Enzyme datasets used to benchmark enzyme-substrate promiscuity models
  ☆35Updated 3 years ago
• marcellszi / rna3db
  A dataset for training and benchmarking deep learning models for RNA structure prediction
  ☆56Updated 5 months ago
• pylelab / rMSA
  RNA Multiple Sequence Alignment
  ☆41Updated last year
• AlexanderKroll / ESP
  ☆72Updated 8 months ago
• oxpig / AntiFold
  Improved antibody structure-based design using inverse folding
  ☆120Updated 3 weeks ago
• evo-design / protein-dpo
  Aligning protein generative models with experimental fitness
  ☆96Updated 3 weeks ago
• AstraZeneca / DiffAbXL
  The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…
  ☆71Updated this week
• hefeda / PGP
  ☆37Updated last week
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆59Updated 3 months ago
• HySonLab / Directed_Evolution
  Protein Design by Machine Learning guided Directed Evolution
  ☆41Updated 2 months ago
• Graylab / GeoDock
  Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.
  ☆94Updated 10 months ago
• levinthal / Pallatom
  ☆94Updated this week
• Graylab / FLAb
  Fitness landscapes for antibodies
  ☆71Updated 4 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆42Updated 6 months ago