luoyunan / ECNetLinks
An evolutionary context-integrated deep learning framework for protein engineering
☆66Updated 3 years ago
Alternatives and similar repositories for ECNet
Users that are interested in ECNet are comparing it to the libraries listed below
Sorting:
- ☆87Updated 3 years ago
- ☆71Updated 4 years ago
- Antibody-Antigen Docking and Affinity Benchmark☆73Updated 5 years ago
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆119Updated 8 months ago
- A collection of tasks to probe the effectiveness of protein sequence representations in modeling aspects of protein design☆108Updated last year
- Code for our paper "Protein sequence design with a learned potential"☆81Updated 2 years ago
- Generative Language Modeling for Antibody Design☆172Updated last year
- Aligning protein generative models with experimental fitness☆111Updated last month
- Official repository of EnzymeFlow☆95Updated 11 months ago
- ☆73Updated 5 years ago
- ☆42Updated 2 years ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆52Updated 4 months ago
- ☆107Updated 2 years ago
- Official Implementation of IgGM☆159Updated last month
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆67Updated 3 months ago
- ☆114Updated 2 years ago
- open source repository☆143Updated last year
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆60Updated last month
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆61Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆98Updated last year
- Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.☆90Updated 4 years ago
- ☆133Updated 5 months ago
- RNA Multiple Sequence Alignment☆46Updated 2 years ago
- ☆74Updated last year
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆55Updated 11 months ago
- DeepAAI☆35Updated 10 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆87Updated 5 months ago
- Code for humanization of antibody and nanobody☆63Updated 2 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆66Updated 8 months ago