Implementation of hotspot2 by Eric Rynes
☆18May 11, 2023Updated 2 years ago
Alternatives and similar repositories for hotspot2
Users that are interested in hotspot2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Software for measuring poly(A) tail length and 3′-end modifications using a high-throughput sequencer☆19Aug 18, 2023Updated 2 years ago
- Scripts used in the analysis of C elegans dRNAseq data☆14Apr 7, 2024Updated 2 years ago
- ☆13Mar 31, 2018Updated 8 years ago
- Training and testing of DeepSEA models.☆15Oct 19, 2015Updated 10 years ago
- Pipeline for identifying viral integration and fusion mRNA reads from NGS data. Manuscript is currently in preparation.☆30Jul 13, 2021Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- NRPSpredictor2 is a program to predict the specificity of bacterial and fungal adenylation domains.☆11Oct 7, 2019Updated 6 years ago
- Use gene expression to predict phenotype sample information☆19Feb 13, 2018Updated 8 years ago
- Tools for querying and analysis of genomic data☆27Oct 26, 2025Updated 6 months ago
- Single-cell RNA-sequencing of differentiating iPS cells reveals dynamic genetic effects on gene expression☆16Jun 28, 2024Updated last year
- Bayesian model selection approach for mediation☆12Apr 17, 2023Updated 3 years ago
- ☆17Aug 1, 2023Updated 2 years ago
- ☆38Sep 5, 2024Updated last year
- Python module for the easy handling and analysis of DNase-seq data☆37Jul 18, 2019Updated 6 years ago
- An example of how I write/publish libraries for node/browsers with npm☆14Jul 19, 2017Updated 8 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- python (cython) wrapper for https://github.com/ryanlayer/giggle for fast interval searching of huge datasets.☆15Feb 13, 2018Updated 8 years ago
- Pan gGnome Viewer☆10Jul 10, 2025Updated 9 months ago
- Population-scale single-cell RNA-seq profiling across dopaminergic neuron differentiation☆22Jun 28, 2024Updated last year
- Tree Health and Plant Biosecurity Initiative - Phytophthora ITS1 Classifier Tool☆10Apr 17, 2026Updated last week
- 16S rRNA Sequencing Data from the Human Microbiome Project☆10Mar 26, 2026Updated last month
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36May 2, 2023Updated 2 years ago
- convert from HDF5 matrix format to txt/tab (tsv) matrix format☆10Aug 3, 2016Updated 9 years ago
- Simple SVG box plots in React☆12Mar 7, 2023Updated 3 years ago
- Information Constraints on Auto-Encoding Variational Bayes☆11May 24, 2018Updated 7 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Slides and demos from our SciPyConf 2019 talk☆13Sep 28, 2021Updated 4 years ago
- Standard operating procedures for H3ABionet data processing and analyses☆11Aug 30, 2021Updated 4 years ago
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- The MolE pre-training framework to learn general molecular representations from unlabeled structures☆12May 26, 2025Updated 11 months ago
- CellRegMap: A statistical framework for mapping context-specific regulatory variants using scRNA-seq☆25Aug 20, 2024Updated last year
- RNA-seq Quantification of Alternative Polyadenylation☆53Mar 21, 2026Updated last month
- DeepSEA in TensorFlow☆32May 24, 2017Updated 8 years ago
- RNASeqReadSimulator is a simple tool to generate simulated single-end or paired-end RNA-Seq reads.☆21Oct 16, 2014Updated 11 years ago
- This is the pipeline of our new article "Enzyme Co-Scientist: Harnessing Large Language Models for Enzyme Kinetic Data Extraction from Li…☆17May 23, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Genomics 3D Visualizer☆14Jun 14, 2024Updated last year
- Building a Chinese pan-genome of 486 individuals☆12Nov 23, 2022Updated 3 years ago
- Generate Procedural 3D Trees in R☆18Apr 17, 2021Updated 5 years ago
- k-means algorithm with (optional) instance weights.☆15Mar 7, 2015Updated 11 years ago
- SeqOthello supports fast coverage query and containment query.☆12May 8, 2019Updated 6 years ago
- extract SV signal from a BAM☆11Jul 26, 2018Updated 7 years ago
- Text::CSV for the Raku Programming Language☆12Apr 17, 2026Updated 2 weeks ago