☆21Mar 26, 2019Updated 7 years ago
Alternatives and similar repositories for deepnano
Users that are interested in deepnano are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Iterative error correction of long reads☆13Dec 9, 2022Updated 3 years ago
- Nanopore basecalling and consensus decoding☆46Jul 22, 2022Updated 3 years ago
- Scripts for Hill et al. (2022) doi:10.1093/molbev/msac085 🟣☆11Apr 28, 2023Updated 2 years ago
- The biggest collection of educational resources of United International University☆10Nov 11, 2022Updated 3 years ago
- A fully convolutional architecture for basecalling nanopore RNA sequencing data☆11Sep 26, 2024Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- HMM-HDP models for MinION signal alignments☆46Apr 10, 2017Updated 9 years ago
- Profile HMM-based hybrid error correction algorithm for long reads☆21Aug 15, 2018Updated 7 years ago
- Methylation/modified base calling separated from basecalling.☆186Sep 17, 2024Updated last year
- UI for RipGrep☆21Apr 11, 2026Updated last week
- ☆26Oct 31, 2019Updated 6 years ago
- Identify subjects from CCTV footages even when there are only limited number of photographs available for the suspected individuals. The …☆11Aug 13, 2022Updated 3 years ago
- Training models for basecalling Oxford Nanopore reads☆115Jan 13, 2022Updated 4 years ago
- SeqWho - A reliable and rapid FASTQ(A) file classifier☆10Jan 21, 2022Updated 4 years ago
- High-quality Nanopore-only genome polisher☆70Aug 16, 2024Updated last year
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Estimate linkage disequilibrium between unphased loci☆11Jun 9, 2015Updated 10 years ago
- BESST - scaffolder for genomic assemblies☆58Jul 6, 2023Updated 2 years ago
- Generate command line parser using getopt_long☆16Dec 11, 2024Updated last year
- Oxford Nanopore Technologies fast5 API software☆154Feb 27, 2024Updated 2 years ago
- A PyTorch Basecaller for Oxford Nanopore Reads☆430Feb 20, 2026Updated last month
- Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by a…☆204May 4, 2023Updated 2 years ago
- This repository contains the code developed for the NanOlympicsMod project.☆12Jan 29, 2024Updated 2 years ago
- Hemang Parikh☆11Jan 12, 2016Updated 10 years ago
- Public repo containing code to train, visualize, and evaluate semi-supervised topic models and baselines for regression/classification on…☆11Apr 15, 2020Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Sep 10, 2022Updated 3 years ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 14 years ago
- ☆12Dec 17, 2025Updated 4 months ago
- ☆13Mar 1, 2026Updated last month
- ☆10Jan 24, 2023Updated 3 years ago
- The modern argument parser for c++ tools☆11Mar 31, 2026Updated 2 weeks ago
- ☆13Feb 14, 2023Updated 3 years ago
- RRSelection: A linkage disequilibrium method to detect selection region across population VCF☆14Feb 11, 2019Updated 7 years ago
- Software to trim the ITS region of FASTQ sequences for amplicon sequencing analysis☆17Mar 26, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- An Oxford Nanopore Basecaller☆70Sep 4, 2021Updated 4 years ago
- Detection of NCLDV signatures in 'omic data☆35Dec 28, 2025Updated 3 months ago
- ☆14Jan 31, 2020Updated 6 years ago
- Structural variant caller☆55Dec 8, 2021Updated 4 years ago
- ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium☆13Mar 31, 2021Updated 5 years ago
- A simple script to calculate q20/q30 percentages of a fastq file (can be gzipped)☆14Aug 31, 2016Updated 9 years ago
- Data Integration Toolkit☆20Dec 8, 2022Updated 3 years ago