interactivereport / OmicsView

Related projects ⓘ

Alternatives and complementary repositories for OmicsView

• interactivereport / bioInfograph
  bioInfograph: an online tool to design and display multi-panel scientific figure interactively
  ☆11Updated 2 years ago
• FloWuenne / scFunctions
  Functions for single cell data analysis
  ☆26Updated 3 years ago
• haniffalab / scRNA-seq_analysis
  Single cell RNA-seq analysis bundle
  ☆33Updated 5 years ago
• Japrin / scPip
  A pipeline for scRNA-seq data analysis
  ☆12Updated 10 months ago
• buenrostrolab / FigR
  Functional Inference of Gene Regulation
  ☆36Updated 4 months ago
• tgen / banovichlab
  Public code repository for the Banovich Lab at the Translational Genomics Research Institute (TGen).
  ☆41Updated 9 months ago
• broadinstitute / gtex-single-nucleus-reference
  Code repository for the snRNA-seq cross-tissue atlas project
  ☆20Updated 2 years ago
• meichendong / SCDC
  SCDC
  ☆42Updated last year
• veltenlab / CloneTracer
  This repository contains scripts to identify healthy and malignant cells from scRNAseq with CloneTracer and process data from Optimized 1…
  ☆24Updated 3 weeks ago
• smorabit / hdWGCNA_paper
  Code used to run the data analysis in the hdWGCNA manuscript (Morabito et al 2022)
  ☆13Updated last year
• CFeregrino / scWGCNA
  scWGCNA
  ☆54Updated 2 years ago
• Teichlab / Pan_fetal_immune
  Collection of scripts for analysis of pan fetal immune atlas
  ☆25Updated 2 years ago
• interactivereport / RNASequest
  ☆18Updated 3 months ago
• satijalab / Integration2019
  ☆16Updated 5 years ago
• sridnona / cb_sniffer
  mutation(barcode) caller for 10x single cell data
  ☆43Updated 4 years ago
• SGI-LungCancer / SingleCell
  Code repository for single cell RNA-seq
  ☆32Updated 4 years ago
• faryabib / too-many-cells
  Cluster single cells and analyze cell clade relationships with colorful visualizations.
  ☆45Updated 3 years ago
• lessonskit / Single-cell-RNA-sequencing-of-human-kidney
  R-code used for single-cell RNA-Seq analysis of kidney data.
  ☆17Updated 5 years ago
• gxiaolab / scAllele
  ☆30Updated 6 months ago
• nghiavtr / SCmut
  ☆31Updated 5 years ago
• shyhihihi / MERCI
  MERCI for tracing of mitochondrion transfer between single cancer and T cells
  ☆20Updated 5 months ago
• interactivereport / CellDepot
  ☆22Updated last year
• mbassalbioinformatics / CnRAP
  Analytical pipeline developed to anlayze Cut and Run data. Inspired by both Henikoff (SEACR) and Orkin (Cut&RunTools) lab pipelines.
  ☆18Updated 3 years ago
• jackbibby1 / SCPA
  R package for pathway analysis in scRNA-seq data
  ☆62Updated 2 months ago
• VCCRI / Sierra
  Discover differential transcript usage from polyA-captured single cell RNA-seq data
  ☆49Updated last year
• TianLab-Bioinfo / scMAGIC
  A robust and accurate cell type classifier for single cell RNA-seq data
  ☆16Updated last year
• quadbio / RNAseq_tutorial
  ☆15Updated 3 weeks ago
• liziyie / scDVA
  An R shiny based tool used for single cell RNA-seq data visualization and analysis.
  ☆31Updated 3 years ago
• ZJUFanLab / CellTalkDB
  A manually curated database of literature-supported ligand-receptor interactions in human and mouse
  ☆25Updated 4 months ago
• PoolLab / generecovery
  ☆29Updated last year