interactivereport / RNASequestLinks
☆18Updated 2 weeks ago
Alternatives and similar repositories for RNASequest
Users that are interested in RNASequest are comparing it to the libraries listed below
Sorting:
- ☆17Updated last year
- SCENIC+ analyses☆15Updated last year
- analyze_geo_microarrays.py : Differential expression analysis of published microarrays datasets from the NCBI Gene Expression Omnibus (GE…☆11Updated 4 years ago
- ☆19Updated last year
- This repository aims to serve as an index of the work described at Salmen & De Jonghe et. al 2022☆23Updated 3 years ago
- CLUMPS adapted to post-translational modifications.☆10Updated 3 months ago
- Transcription Factor Binding Prediction from ATAC-seq and scATAC-seq with Deep Neural Networks☆28Updated 4 months ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆31Updated last month
- model-based understanding of single-cell CRISPR screening☆24Updated 8 months ago
- PTa Analysis TOolkit☆13Updated last week
- Please consider using/contributing to https://github.com/nf-core/scdownstream☆25Updated last year
- 🏺 Exploring novel tumor epitope identification☆35Updated 4 years ago
- ☆35Updated 3 years ago
- A pipeline for identifying indel derived neoantigens using RNA-Seq data☆30Updated 3 years ago
- Methods to use SNPs or gene expression to classify single cell RNAseq to reference profiles☆29Updated 5 years ago
- A toolkit for optimal workflow recommendation for proteomics data differential expression analysis☆17Updated 10 months ago
- Materials and scripts for building cell type encyclopedia table☆20Updated 7 months ago
- Inference of TCR motifs☆32Updated 2 months ago
- COSMOS (Causal Oriented Search of Multi-Omic Space) is a method that integrates phosphoproteomics, transcriptomics, and metabolomics data…☆63Updated last month
- ☆16Updated 5 months ago
- VirusScan Pipeline☆11Updated 6 months ago
- CellDepot: A unified repository for scRNA-seq data and visual exploration. J Mol Biol. 2021 Dec 28:167425. doi: 10.1016/j.jmb.2021.167425…☆24Updated 2 years ago
- cell type deconvolution for multi-condition bulk RNA-seq data☆27Updated 3 years ago
- MutSig2CV from Lawrence et al. 2014☆31Updated 5 years ago
- MACA: Marker-based automatic cell-type annotation for single cell expression data☆25Updated 2 years ago
- Splicing Neo Antigen Finder (SNAF) is an easy-to-use Python package to identify splicing-derived tumor neoantigens from RNA sequencing da…☆48Updated 6 months ago
- ☆41Updated this week
- OmicsView: omics data analysis through interactive visual analytics☆16Updated 3 years ago
- Easy and comprehensive biological network reconstruction and analysis☆31Updated 11 months ago
- Immune Cell Gene Signatures for Profiling the Microenvironment of Solid Tumours☆27Updated 4 years ago