inab / BIOLITMAPLinks
Code for the paper "BIOLITMAP: a web-based geolocated and temporal visualization of the evolution of bioinformatics publications" in Oxford Bioinformatics.
☆20Updated 6 years ago
Alternatives and similar repositories for BIOLITMAP
Users that are interested in BIOLITMAP are comparing it to the libraries listed below
Sorting:
- A standalone interactive application for detecting biological significance on a set of genes☆40Updated 4 years ago
- 📊 An R package of RNA-seq workflow☆15Updated 3 years ago
- novoBreak: local assembly for breakpoint detection in cancer genomes☆25Updated 7 years ago
- An R Package based on JavaScript libraries for Visualization of Interactive Circos Plot☆28Updated 3 years ago
- A command line tool to compute mapping statistics from a BAM file☆25Updated 3 years ago
- AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project☆16Updated 2 years ago
- Long read to rMATS☆32Updated 2 years ago
- BrumiR: A toolkit for de novo discovery of microRNAs from sRNA-seq data.☆12Updated 3 years ago
- Integrative analysis of structural variations.☆40Updated 2 years ago
- fastx-utils using klib☆20Updated 5 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆18Updated 3 years ago
- Flexible Bayesian inference of mutational signatures☆41Updated 3 years ago
- common useful script☆32Updated 3 weeks ago
- Geared towards life scientists wanting to be able to understand and use basic statistical and machine learning methods☆16Updated 3 weeks ago
- an R/Shiny application for interactive creation of non-circular plots of whole genomes☆45Updated 8 months ago
- A set of tools to annotate VCF files with expression and readcount data☆30Updated 2 weeks ago
- Personal diploid genome creation and coordinate conversion☆30Updated 10 months ago
- SQUID detects both fusion-gene and non-fusion-gene structural variations from RNA-seq data☆42Updated 3 years ago
- A bioinformatics tool for SV detection and virus integration discovery☆21Updated 8 years ago
- Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.☆35Updated 2 years ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 8 months ago
- For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and…☆36Updated 2 years ago
- Documentation for vcfR☆11Updated 9 months ago
- Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.☆37Updated last year
- Adapters for trimming☆30Updated 7 years ago
- A software for calculating telomere length☆73Updated 7 years ago
- A web-based application to perform Gene Set Enrichment Analysis (GSEA) using clusterProfiler and shiny R libraries☆16Updated 6 years ago
- Ultra-efficient taxonomic mapping of NGS data☆51Updated 4 years ago
- A Shiny-based server framework for retrieving, analyzing and visualizing the large genomic variations data in a lab.☆19Updated last year
- interactive plots for differential expression analysis☆34Updated 7 months ago