Teichlab / tracerLinks
TraCeR - reconstruction of T cell receptor sequences from single-cell RNAseq data
☆130Updated last year
Alternatives and similar repositories for tracer
Users that are interested in tracer are comparing it to the libraries listed below
Sorting:
- kallisto | bustools workflow for pre-processing single-cell RNA-seq data☆118Updated 3 years ago
- Tools for single-cell data processing☆127Updated last year
- ☆119Updated 2 years ago
- chromatin Variability Across Regions (of the genome!)☆181Updated last year
- Efficient genotyping bi-allelic SNPs on single cells☆150Updated last year
- AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-…☆105Updated 3 years ago
- Fast and accurate in silico inference of HLA genotypes from RNA-seq☆142Updated last year
- R package to access DoRothEA's regulons☆150Updated last year
- ☆65Updated 2 years ago
- [Deprecated, see https://github.com/antigenomics/mirpy and other tools @antigenomics] Post-analysis of immune repertoire sequencing data☆140Updated last year
- Java tools for analyzing Drop-seq data☆130Updated last week
- Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods☆97Updated 2 years ago
- mgatk: mitochondrial genome analysis toolkit☆108Updated 8 months ago
- A repository for the design and analysis of pooled single cell RNA-seq perturbation experiments.☆95Updated 6 years ago
- A tool that allows to get UMI counts from a single cell protein assay