hmdlab / raptgen
☆24Updated last year
Alternatives and similar repositories for raptgen:
Users that are interested in raptgen are comparing it to the libraries listed below
- Code and data to reproduce analyses in Biswas et al. (2020) "Low-N protein engineering with data-efficient deep learning".☆57Updated 3 years ago
- Evolutionary velocity with protein language models☆88Updated last year
- Mutation effects predicted from sequence co-variation☆63Updated 7 years ago
- ☆65Updated 5 months ago
- The code used to generate the results from Parkinson / Hard et al. 2022☆17Updated 4 months ago
- ☆104Updated last year
- Fast protein structure searching or your money back☆95Updated 3 weeks ago
- Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.☆32Updated 2 years ago
- Protein language model trained on coding DNA☆46Updated 4 months ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆34Updated 6 months ago
- Feature map and function annotation of Proteins☆32Updated 9 months ago
- RNA Multiple Sequence Alignment☆33Updated last year
- Geometric deep learning of protein–DNA binding specificity☆62Updated last week
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆81Updated 11 months ago
- Collecting AMP MIC data from different sources, then running a GAN to output promising sequences☆67Updated 7 months ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆65Updated last year
- Code repository of "Deep generative design of RNA family sequences"☆31Updated 7 months ago
- ☆71Updated last year
- Generator and regressor neural networks for antimicrobial peptides☆21Updated last year
- ☆34Updated last month
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆31Updated last year
- python tools for TCR:peptide-MHC modeling and analysis☆71Updated 11 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆52Updated 3 months ago
- Neural Networks for Protein Sequence Alignment☆119Updated 4 months ago
- Public repository describing training and testing of AntiBERTa.☆58Updated last year
- ☆49Updated 9 months ago
- ☆29Updated last year
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆127Updated last month
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 2 months ago