Alternatives and similar repositories for ewastools

Users that are interested in ewastools are comparing it to the libraries listed below

• bigomics / omicsplayground
  Visual self-service analytics platform for big omics data.
  ☆125Updated this week
• jminnier / STARTapp
  The START App: R Shiny Transcriptome Analysis Resource Tool
  ☆90Updated 4 years ago
• waldronlab / MultiAssayExperiment
  Bioconductor package for management of multi-assay data
  ☆72Updated 2 months ago
• NightingaleHealth / ggforestplot
  An R package to create forestplots of measures of effects with their confidence intervals.
  ☆61Updated 4 years ago
• igordot / msigdbr
  MSigDB gene sets for multiple organisms in a tidy data format
  ☆79Updated last week
• federicomarini / pcaExplorer
  pcaExplorer - Interactive exploration of Principal Components of Samples and Genes in RNA-seq data
  ☆56Updated 2 months ago
• VPetukhov / ggrastr
  Raster geoms for ggplot2
  ☆221Updated 2 years ago
• tidyomics / plyranges
  A grammar of genomic data transformation
  ☆147Updated 3 weeks ago
• stephenslab / mashr
  An R package for multivariate adaptive shrinkage.
  ☆92Updated 8 months ago
• rnabioco / valr
  Genome Interval Arithmetic in R
  ☆93Updated 2 weeks ago
• Bioconductor / BiocStickers
  Stickers for some Bioconductor packages - feel free to contribute and/or modify.
  ☆126Updated this week
• raivokolde / pheatmap
  Pretty heatmaps
  ☆263Updated last month
• variani / lme4qtl
  Mixed models @lme4 + custom covariances + parameter constraints
  ☆53Updated 4 years ago
• YuLab-SMU / aplot
  Decorate a plot with associated information
  ☆108Updated 2 weeks ago
• federicomarini / GeneTonic
  Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
  ☆78Updated 2 months ago
• hansenlab / minfi
  Devel repository for minfi
  ☆61Updated last year
• stemangiola / tidyseurat
  Seurat meets tidyverse. The best of both worlds.
  ☆160Updated 11 months ago
• stemangiola / tidybulk
  Brings bulk and pseudobulk transcriptomics to the tidyverse
  ☆174Updated 3 weeks ago
• csoneson / ExploreModelMatrix
  Explore design matrices interactively with R/Shiny
  ☆37Updated 3 months ago
• egeulgen / pathfindR
  pathfindR: Enrichment Analysis Utilizing Active Subnetworks
  ☆192Updated last month
• YuLab-SMU / ggbreak
  An implementation of scale functions for setting axis breaks of a 'gg' plot.
  ☆138Updated 2 weeks ago
• hawn-lab / workshops_UW_Seattle
  ☆26Updated 4 years ago
• yanlinlin82 / ggvenn
  Venn Diagram by ggplot2, with really easy-to-use API.
  ☆176Updated 5 months ago
• const-ae / tidygenomics
  Tidy Verbs for Dealing with Genomic Data Frames https://const-ae.github.io/tidygenomics/
  ☆104Updated 4 years ago
• stemangiola / bioc_2020_tidytranscriptomics
  Workshop on tidytranscriptomics: Performing tidy transcriptomics analyses with tidybulk, tidyverse and tidyheatmap
  ☆26Updated 4 years ago
• lawremi / ggbio
  Grid and ggplot2 based visualization for biological data
  ☆113Updated last year
• RGLab / ggcyto
  Visualize Cytometry data with ggplot2
  ☆59Updated last week
• SaskiaFreytag / schex
  ☆74Updated last year
• GabrielHoffman / variancePartition
  Quantify and interpret divers of variation in multilevel gene expression experiments
  ☆64Updated 3 weeks ago
• ramiromagno / gwasrapidd
  gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
  ☆97Updated last month