Impute DNA methylation from WGBS data.
☆11Apr 23, 2019Updated 7 years ago
Alternatives and similar repositories for methimpute
Users that are interested in methimpute are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- R/BioC package to estimate the cell composition of whole blood in DNA methylation samples in microarray or sequencing platforms☆18Nov 26, 2025Updated 5 months ago
- A port of the matrixStats API to work with DelayedMatrix objects from the DelayedArray package☆15Apr 16, 2025Updated last year
- ☆10Aug 21, 2025Updated 8 months ago
- methtuple is a methylation caller for methylation events that co-occur on the same DNA fragment from high-throughput bisulfite sequencing…☆16Apr 5, 2022Updated 4 years ago
- COMETgazer mehylation analysis software suite☆10Jul 21, 2019Updated 6 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Templates for pandoc☆22Nov 28, 2013Updated 12 years ago
- DNA kmer operations for nim☆14Apr 24, 2022Updated 4 years ago
- Clonality Inference in Multiple Tumor Samples using Phylogeny☆15May 8, 2015Updated 10 years ago
- Simulation tool for ChIP- and other -seq experiments☆14Mar 13, 2023Updated 3 years ago
- ☆16Jan 2, 2024Updated 2 years ago
- C++ library for analysing and storing large-scale cohorts of sequence variant data☆17Aug 27, 2019Updated 6 years ago
- Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis f…☆20Nov 19, 2020Updated 5 years ago
- Inky dash is an interface for Pimoroni's line of Raspberry Pi ePaper displays. It is intended to be self-hosted from a Raspberry Pi and a…☆19Apr 19, 2026Updated 2 weeks ago
- RelocaTE2☆18Oct 6, 2023Updated 2 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- A minimalist, open-source, low-cost sensor platform built around the LoRa protocol☆17Aug 20, 2024Updated last year
- A Weighted Exact Test for Mutually Exclusive Mutations in Cancer☆21Sep 30, 2018Updated 7 years ago
- 2024 BreedWheat Genomic Selection pipeline☆15Jan 3, 2024Updated 2 years ago
- Layout module for raw de novo genome assembly of long uncorrected reads.☆21Feb 2, 2021Updated 5 years ago
- Gene expression viewer template☆12Aug 30, 2017Updated 8 years ago
- Package Homepage: http://bioconductor.org/packages/devel/bioc/html/annotatr.html Bug Reports: https://support.bioconductor.org/p/new/post…☆27Oct 14, 2025Updated 6 months ago
- The latest version of Net-Trim which solves the actual constrained problem☆23May 22, 2020Updated 5 years ago
- Classifies genes as an oncogene, tumor suppressor gene, or as a non-driver gene by using Random Forests☆50Aug 3, 2024Updated last year
- Genome guided re-segmention and visualization for raw nanopore sequencing data.☆47Dec 20, 2018Updated 7 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Calling R from python use Rpy2 /Windows☆10Sep 22, 2017Updated 8 years ago
- Machine learning use cases for teaching☆13Jul 12, 2017Updated 8 years ago
- computational training at Fred Hutch☆12Jun 11, 2021Updated 4 years ago
- BrainSeq Phase II project lead by LIBD for the BrainSeq Consortium☆11Jan 7, 2024Updated 2 years ago
- a graph layout js library depended on ogdf and emscripten☆11Dec 7, 2021Updated 4 years ago
- Analyses for Manuscript "Sensitive detection of renal cell carcinoma using plasma and urine cell-free DNA methylomes"☆12Aug 4, 2020Updated 5 years ago
- C code to validate a fasta file☆14Mar 2, 2021Updated 5 years ago
- Lift-over alignments from variant-aware references☆34Mar 4, 2023Updated 3 years ago
- R scripts and executable binder for blog post about using Purrr for mapping over ML hyperparameters☆11May 15, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆11Mar 13, 2022Updated 4 years ago
- Examples of kallisto + sleuth☆11May 18, 2017Updated 8 years ago
- All the fun and adventure of MHC naming, now in Python☆10Apr 5, 2026Updated 3 weeks ago
- Python-based reports for Postgres including a data dictionary generator☆16Nov 13, 2015Updated 10 years ago
- Seeking information like heteroplasmy, structure variants, etc. on Mitochondrial genome from next generation sequencing☆41Dec 11, 2018Updated 7 years ago
- SCREW: A Reproducible Workflow for Single-Cell Epigenomics☆11Oct 22, 2017Updated 8 years ago
- Web version of GenomeRunner☆11Nov 6, 2016Updated 9 years ago