hammerlab / t-cell-relation-extractionLinks
Literature mining for T cell relations
☆23Updated 3 years ago
Alternatives and similar repositories for t-cell-relation-extraction
Users that are interested in t-cell-relation-extraction are comparing it to the libraries listed below
Sorting:
- An unsupervised transfer learning approach for rare disease transcriptomics☆46Updated 6 years ago
- A Python framework for integrating biological databases and structured data sources in Biological Expression Language (BEL)☆21Updated 4 years ago
- This is the public repository for the EPIC tool.☆19Updated 3 years ago
- Tools related to the Genomics of Drug Sensitivity in Cancer (GDSC) projects (http://www.cancerrxgene.org/ )☆36Updated 4 years ago
- ☆26Updated 5 years ago
- Analysis on stop reasons☆10Updated last year
- Multi-omics Autoencoder Integration: Deep learning-based heterogenous data analysis toolkit☆50Updated 2 years ago
- Simple and efficient access to genomic data for deep learning models.☆42Updated 6 years ago
- Monet: An open-source Python package for analyzing scRNA-Seq data using PCA-based latent spaces☆40Updated 4 years ago
- An R package to fit dose response curves for data from the Genomics of Drug Sensitivity of Cancer (GDSC) project.☆28Updated 2 years ago
- ☆22Updated 6 years ago
- Harmonizing pathway databases using Biological Expression Language (BEL)☆20Updated last year
- ☆24Updated 2 months ago
- ☆13Updated 6 years ago
- TCGA data acquisition and processing for Project Cognoma☆22Updated 7 years ago
- netSmooth: A Network smoothing based method for Single Cell RNA-seq imputation☆28Updated last year
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 7 years ago
- A Python package for benchmarking pathway database with functional enrichment and classification methods☆13Updated 4 years ago
- scRNAseq integration with triplet neural networks☆41Updated last week
- Fine-mapping pipeline for Open Targets Genetics☆28Updated 3 years ago
- ☆18Updated 9 months ago
- Scripts and resources to create Hetionet v1.0, a heterogeneous network for drug repurposing☆33Updated 8 years ago
- DRUG (Digital RNA with pertUrbation of Genes)-seq data analysis pipeline☆34Updated 10 months ago
- ☆43Updated 5 years ago
- Notebooks accompanying the paper "Navigating the pitfalls of applying machine learning in genomics"☆46Updated 2 years ago
- mantis-ml: Stochastic semi-supervised learning to prioritise genes from high throughput genomic screens☆30Updated 2 years ago
- examples to run monorail externally☆19Updated last year
- Code for classifying unstructured text to tissue ontology terms using natural language processing and machine learning.☆27Updated last year
- ☆12Updated 2 years ago
- Predict mutated T-cell epitopes from sequencing data☆30Updated 11 months ago