Literature mining for T cell relations
☆23Aug 5, 2022Updated 3 years ago
Alternatives and similar repositories for t-cell-relation-extraction
Users that are interested in t-cell-relation-extraction are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Table compiling the list of biomedically-related corpora available for named entity recognition (and some also suitable for association d…☆18Mar 15, 2018Updated 8 years ago
- Python package for matrix storage and operations on hetnets☆14Mar 30, 2023Updated 3 years ago
- ☆26Jan 14, 2021Updated 5 years ago
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 8 years ago
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code space for 'Evaluation of large language models for discovery of gene set function'☆44Dec 17, 2024Updated last year
- ☆15Jun 9, 2018Updated 8 years ago
- Implementation of FixMatch in PyTorch and experimentations☆12Aug 9, 2020Updated 5 years ago
- ☆76Feb 4, 2024Updated 2 years ago
- A library for the deconvolution of bulk cell samples using single-cell RNA expression data.☆23Nov 3, 2021Updated 4 years ago
- A Grammar of Data Manipulation for Omics Data☆21Aug 31, 2020Updated 5 years ago
- ☆10Jun 21, 2025Updated last year
- NILC-USP at SemEval-2017 Task 4: A Multi-view Ensemble for Twitter Sentiment Analysis☆10Feb 19, 2017Updated 9 years ago
- ☆13Apr 16, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- R code to work with the NIH RePORTER API☆11Feb 11, 2026Updated 5 months ago
- Saber is a deep-learning based tool for information extraction in the biomedical domain. Pull requests are welcome! Note: this is a work …☆102Jul 14, 2020Updated 6 years ago
- PRedictor of IMmunogenic Epitopes☆34Sep 24, 2025Updated 10 months ago
- ☆29Sep 4, 2023Updated 2 years ago
- ☆20Feb 17, 2021Updated 5 years ago
- AetherCell is a hierarchical generative framework designed to predict context-specific transcriptomic responses to drugs and genetic pert…☆20Updated this week
- class materials for MCB517A through UW/Fred Hutch☆12Dec 5, 2019Updated 6 years ago
- Probabilistic HLA typing☆35Aug 31, 2019Updated 6 years ago
- ☆25Dec 5, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Convert TCR gene names☆15Dec 26, 2025Updated 6 months ago
- Extracting biomedical relationships from literature with Snorkel 🏊☆58Feb 1, 2021Updated 5 years ago
- Detection of allele-specific subclonal copy number alterations from single-cell transcriptomic data.☆38Apr 13, 2026Updated 3 months ago
- Companion to "A genome-wide almanac of co-essential modules assigns function to uncharacterized genes" (https://doi.org/10.1101/827071)☆27Jul 19, 2022Updated 4 years ago
- HLA-II ligand predictor.☆49Jul 17, 2026Updated last week
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- This repository contains the corpora and supplementary data, along with instructions for recreating the experiments, for our paper: "Towa…☆15Jul 26, 2019Updated 6 years ago
- Seven Bridges API Client, CWL Schema, Meta Schema, and SDK Helper in R☆37Jan 28, 2022Updated 4 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆25Nov 17, 2023Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Ontology Tutorial☆73Nov 22, 2022Updated 3 years ago
- Pipeline to detect HLA disruption from WES and RNAseq data☆23Feb 17, 2025Updated last year
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆52Sep 12, 2019Updated 6 years ago
- ☆49Jul 7, 2022Updated 4 years ago
- Repo for downloading and storing OMIM data☆19Oct 6, 2016Updated 9 years ago
- Cheminformatic analysis of small molecule type drugs in DrugBank for their ability to form nanoparticles with indocyanine dyes.☆11Apr 30, 2018Updated 8 years ago
- A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).☆157Mar 12, 2023Updated 3 years ago