hetio / hetmatpy
Python package for matrix storage and operations on hetnets
☆14Updated 2 years ago
Alternatives and similar repositories for hetmatpy:
Users that are interested in hetmatpy are comparing it to the libraries listed below
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated 9 months ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Updated 5 years ago
- Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…☆9Updated 4 years ago
- Ten quick tips to finish that manuscript that's 90% complete.☆13Updated 3 years ago
- SciLK: a Scientific natural Language Toolkit☆8Updated 6 years ago
- The mwtab package is a Python library that facilitates reading and writing files in mwTab format used by the Metabolomics Workbench for a…☆12Updated this week
- Namespace encoding hierarchical relationships between proteins, protein families, and protein complexes.☆12Updated 4 years ago
- A project to capture biological pathway data from academic papers☆29Updated 3 weeks ago
- biochem4j: integrated and extensible biochemical knowledge through graph databases☆12Updated 7 years ago
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- A place for all knowledge regarding Research Data Management (RDM) in Chemistry☆11Updated 3 weeks ago
- 📐 Results for the Ranking Metrics submission @ GLB 2022☆11Updated 3 years ago
- ☆25Updated 2 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆24Updated 11 months ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 4 years ago
- Network inference by fusing data from diverse distributions☆14Updated 8 years ago
- MyChem.info: A BioThings API for chemical/drug annotations☆16Updated this week
- Container-based installation of pymol, with interaction through the browser via Jupyter notebook☆20Updated 5 years ago
- Proteins as words, genomes as documents.☆20Updated 4 years ago
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11Updated 4 years ago
- screenlamp is a Python toolkit for hypothesis-driven virtual screening☆23Updated 7 years ago
- Machine learning for molecules workshop 2022☆14Updated 2 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 8 years ago
- 👁️🗨️ Scientists often do the same bad stuff. Automate giving feedback during peer review.☆26Updated 6 months ago
- Benchmark for LLM-based Agents in Computational Biology☆34Updated 3 weeks ago
- 📖 Generation and Applications of Knowledge Graphs in Systems and Networks Biology☆29Updated 5 years ago
- PointNet for Deep Rank: protein-protein interaction scoring using neural networks☆9Updated 4 years ago
- Semantic Reader of the Scientific Literature☆12Updated last year
- 🪝 What's the latest version for each database?☆27Updated this week