hetio / hetmatpyLinks
Python package for matrix storage and operations on hetnets
☆15Updated 2 years ago
Alternatives and similar repositories for hetmatpy
Users that are interested in hetmatpy are comparing it to the libraries listed below
Sorting:
- Resources for grounding protein families and complexes from text and describing their hierarchical relationships.☆18Updated last year
- Python library (C++ backend) for degree-preserving network randomization☆14Updated 5 years ago
- Network representation learning on drug-target-side effects-indication graphs for side effect prediction☆13Updated 5 years ago
- This repository contains the code accompanying the paper "Learning Informative Representations of Biomedical Relations with Latent Variab…☆14Updated 3 years ago
- The Baseline Site Selection Tool implements simulation tools for clinical trial enrollment.☆18Updated 2 years ago
- Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…☆9Updated 4 years ago
- 📐 Results for the Ranking Metrics submission @ GLB 2022☆11Updated 3 years ago
- A project to capture biological pathway data from academic papers☆29Updated 3 months ago
- jinja2-enabled jupyter notebooks☆37Updated 2 weeks ago
- 📖 A review of KGEM packages and frameworks at https://pykeen.github.io/kgem-software-review.☆11Updated last year
- A computational library for learning and evaluating biological knowledge graph embeddings - please see the main PyKEEN repo at https://gi…☆45Updated 2 years ago
- Open Targets Library ETL Pipeline | Apache Beam☆16Updated 4 years ago
- PyBioPAX: A python implementation of the BioPAX object model☆24Updated last year
- Toolkit for constructing, analyzing, and visualizing data-driven ontologies☆18Updated 6 years ago
- Ten quick tips to finish that manuscript that's 90% complete.☆13Updated 3 years ago
- Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.☆14Updated 2 years ago
- 🪝 What's the latest version for each database?☆27Updated this week
- code for Gogleva et al manuscript☆45Updated 2 years ago
- OCEAN - Optimized Cross rEActivity estimatioN☆11Updated 5 years ago
- A place for all knowledge regarding Research Data Management (RDM) in Chemistry☆11Updated last week
- ☆25Updated 3 years ago
- A knowledge resource on cell lines - From SIB CALIPHO group☆14Updated last year
- Retrieve and process PubTator annotations☆44Updated last year
- Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.☆11Updated 5 years ago
- Draft cell type definitions from data - candidates for inclusion in CL☆12Updated last week
- Target prioritization using network representation learning☆11Updated 3 years ago
- Reproducible drug repurposing: a Python-based framework for building drug-disease association classifiers☆15Updated 7 years ago
- A Bio2BEL package for DrugBank (https://www.drugbank.ca)☆9Updated 4 years ago
- Major Histocompatibility Complex (MHC) Binding Affinity Prediction☆10Updated 4 years ago
- Cataloging pharmacotherapies in clinical trial from ClinicalTrials.gov☆27Updated 9 years ago