ryan-williams / git-helpersLinks
1,743 Git aliases and scripts
☆26Updated last week
Alternatives and similar repositories for git-helpers
Users that are interested in git-helpers are comparing it to the libraries listed below
Sorting:
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆69Updated 3 years ago
- Load genomic BAM files using Apache Spark☆21Updated 7 years ago
- A Variant Caller, Distributed. Apache 2 licensed.☆71Updated 6 years ago
- Bioinformatics for the Scala programming language☆112Updated last month
- Notebook service☆44Updated this week
- BioFabric is an open-source network visualization tool☆88Updated 6 years ago
- Open source formats for scalable genomic processing systems using Avro. Apache 2 licensed.☆40Updated 7 months ago
- A genomics pipeline build on top of the GATK Queue framework. Main repository: https://github.com/NationalGenomicsInfrastructure/piper (m…☆21Updated 9 years ago
- Ready-to-go Parquet-formatted public 'omics datasets☆30Updated 9 years ago
- Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly☆85Updated 7 years ago
- Parallel Genomic Analysis Toolkit☆14Updated 6 years ago
- WDL plugin for pytest☆48Updated 2 years ago
- Deprecated☆100Updated 6 years ago
- Efficient, distributed downloads of large files from S3 to HDFS using Spark.☆17Updated 8 years ago
- Variant Caller Analysis Dashboard and Data Management System☆36Updated 9 years ago
- Python graph database framework for bioinformatics☆94Updated 3 years ago
- A collection of bioinformatics file format specimens to test against☆47Updated 5 years ago
- Rawls service for DSDE☆25Updated this week
- BioDSL (pronounced Biodiesel) is a Domain Specific Language for creating bioinformatic analysis workflows.☆16Updated 7 years ago
- BigWIG, BigBED and TDF for the JVM☆14Updated 4 years ago
- An implementation of Nextflow.io with Language Workbench Technology. The project helps create computational pipelines that run with the N…☆22Updated 9 years ago
- A fast, parallel, streaming multipart uploader for S3☆14Updated 8 years ago
- An example of bioinformatics and bigdata tools can playing nicely together☆14Updated 9 years ago
- A scalable genome browser. Apache 2 licensed.☆126Updated 2 years ago
- Data portal for submitting and viewing genomic data☆14Updated last month
- ☆31Updated 2 weeks ago
- Quality control methods for human genomic variants.☆62Updated 3 years ago
- An argument parsing library for Scala☆11Updated 3 months ago
- A modular open-source toolkit for building web and electron data visualization applications☆28Updated 6 years ago
- API for converting JVM objects to representations by MIME type, for the Jupyter ecosystem.☆25Updated 5 years ago