Python API for Genomic Data Commons
☆20Sep 27, 2016Updated 9 years ago
Alternatives and similar repositories for pygdc
Users that are interested in pygdc are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Jun 7, 2018Updated 8 years ago
- Use somatic mutations to choose a personalized cancer vaccine (tumor-specific immunogenic peptides)☆16Sep 23, 2016Updated 9 years ago
- DEPRECATED: Store and query public TCGA data☆11Sep 15, 2016Updated 9 years ago
- Python and UNIX CLI utilities to simplify interaction with the NIH/NCI Genomics Data Commons☆31Oct 11, 2018Updated 7 years ago
- Code for effectively dealing with running CmdStan... from R.... because reasons...☆13Jun 17, 2022Updated 4 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- A tool to annotate human VCF files with PolyPhen2 effect measures☆10Dec 26, 2022Updated 3 years ago
- ☆18Apr 6, 2023Updated 3 years ago
- A curated list of awesome clonality and tumor heterogeneity resources☆16Jun 25, 2019Updated 7 years ago
- Chart to aid in understanding mutations and their location on a gene.☆22Oct 5, 2022Updated 3 years ago
- In-silico doublet annotation for single cell RNA sequencing data☆11Jan 7, 2026Updated 7 months ago
- Ranked vaccine peptides for personalized cancer immunotherapy☆63Jun 20, 2026Updated last month
- Bayesian analysis of MPRA and other high-throughput genomic assays☆10Jul 27, 2020Updated 6 years ago
- Canonical SGE cluster genotype imputation pipeline☆12Jan 18, 2016Updated 10 years ago
- Stray has been renamed fido, development continues at jsilve24/fido☆23Jan 26, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data☆11Apr 19, 2023Updated 3 years ago
- Ontology for Biobanking☆16Jun 11, 2025Updated last year
- Repo for downloading and storing OMIM data☆20Oct 6, 2016Updated 9 years ago
- Spark-based variant calling, with experimental support for multi-sample somatic calling (including RNA) and local assembly☆85Mar 22, 2026Updated 4 months ago
- Clinical Data Subscriptions: Develop FHIR Subscriptions resource to push updates of medical record information to authorized recipients …☆14Jun 18, 2022Updated 4 years ago
- Reproducing the paper "The continuous Bernoulli: fixing a pervasive error in variational autoencoders" for the Reproducibility Challenge …☆12Jul 25, 2024Updated 2 years ago
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 7 years ago
- Sugar for FHIR profiles☆15Nov 12, 2022Updated 3 years ago
- Mixture-of-Experts Variational Autoencoder for Clustering and Generating from Similarity-Based Representations on Single Cell Data☆13Apr 22, 2021Updated 5 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆12Aug 27, 2024Updated last year
- ☆11Jan 18, 2023Updated 3 years ago
- Python client for MyVariant.info web services.☆23Jan 14, 2025Updated last year
- Source code for the FHIR tools on SITE☆13Nov 26, 2024Updated last year
- pdbTool: An object-oriented Julia tool to parse PDB files and work with them☆17Jan 24, 2021Updated 5 years ago
- ☆11Jul 13, 2018Updated 8 years ago
- the server backend for ml-dash☆10Apr 21, 2025Updated last year
- ☆13Jun 16, 2025Updated last year
- ☆17Jun 29, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- All of Us public data browser.☆15Updated this week
- Services and guidelines for normalizing drug and other therapy terms☆15Jun 8, 2026Updated 2 months ago
- The ALL Arduino Nano 33 BLE Sense Classifier is an experiment to explore how low powered microcontrollers, specifically the Arduino Nano …☆10Jul 21, 2021Updated 5 years ago
- SpatialCorr: Identify gene sets with spatially varying correlation☆18Jan 2, 2024Updated 2 years ago
- A stable diffusion demo for napari☆11Jun 7, 2026Updated 2 months ago
- R package for nonparametric estimation of counterfactual survival functions and survival contrasts from right-censored data with an obser…☆13Jul 7, 2023Updated 3 years ago
- Tests Allelic Expression data for extreme imbalance w.r.t. population☆11Oct 8, 2021Updated 4 years ago