Alternatives and similar repositories for ProLLaMA

Users that are interested in ProLLaMA are comparing it to the libraries listed below

• PKU-YuanGroup / TaxDiff
  The official code for "TaxDiff: Taxonomic-Guided Diffusion Model for Protein Sequence Generation"
  ☆67Updated 10 months ago
• DeepGraphLearning / ProtST
  [ICML-23 ORAL] ProtST: Multi-Modality Learning of Protein Sequences and Biomedical Texts
  ☆97Updated last year
• Yijia-Xiao / Protein-LLM-Survey
  Large Language Models in Protein: A Comprehensive Survey
  ☆92Updated 2 months ago
• QizhiPei / Awesome-Biomolecule-Language-Cross-Modeling
  Awesome-Biomolecule-Language-Cross-Modeling: a curated list of resources for paper "Leveraging Biomolecule and Natural Language through M…
  ☆214Updated 2 months ago
• westlake-repl / SaprotHub
  Making Protein Modeling Accessible to All Biologists
  ☆113Updated last week
• westlake-repl / ProTrek
  ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
  ☆112Updated 2 weeks ago
• chao1224 / ProteinDT
  A Text-guided Protein Design Framework, Nat Mach Intell 2025 (https://www.nature.com/articles/s42256-025-01011-z)
  ☆86Updated 5 months ago
• terry-r123 / RNABenchmark
  [NeurIPS 2024] BEACON: Benchmark for Comprehensive RNA Tasks and Language Models
  ☆43Updated 10 months ago
• ai4protein / ProSST
  🧬 Advanced hybrid language model for directed protein evolution. (NeurIPS 2024)
  ☆125Updated 3 weeks ago
• Eikor / InstructPLM
  The first large protein language model trained follows structure instructions.
  ☆81Updated last month
• THUDM / MSAGPT
  MSAGPT
  ☆34Updated 7 months ago
• TencentAI4S / tfold
  open source code for Tencent tFold
  ☆101Updated 3 months ago
• westlake-repl / SaProt
  Saprot: Protein Language Model with Structural Alphabet (AA+3Di)
  ☆465Updated 2 weeks ago
• bozhenhhu / A-Review-of-pLMs-and-Methods-for-Protein-Structure-Prediction
  ☆42Updated 2 years ago
• varun-shanker / structural-evolution
  ☆109Updated 11 months ago
• GENTEL-lab / OriGene
  OriGene: A Self-Evolving Virtual Disease Biologist for Mechanism-Guided Therapeutic Target Discovery
  ☆103Updated 3 weeks ago
• THUNLP-MT / dyMEAN
  This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"
  ☆110Updated 4 months ago
• zhengkangjie / ESM-AA
  ☆73Updated 4 months ago
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆324Updated 2 weeks ago
• THUNLP-MT / MEAN
  This repo contains the codes for our paper Conditional Antibody Design as 3D Equivariant Graph Translation.
  ☆95Updated 2 years ago
• Graylab / IgLM
  Generative Language Modeling for Antibody Design
  ☆151Updated 8 months ago
• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆130Updated last year
• BytedProtein / ByProt
  ☆192Updated 9 months ago
• bowen-gao / DrugCLIP
  [NeurIPS 2023] DrugCLIP: Contrastive Protein-Molecule Representation Learning for Virtual Screening
  ☆95Updated last year
• NVIDIA-Digital-Bio / proteina
  Proteina is a new large-scale flow-based protein backbone generator that utilizes hierarchical fold class labels for conditioning and rel…
  ☆177Updated 3 weeks ago
• bytedance / dplm
  The Family of Diffusion Protein Language Models (DPLM)
  ☆194Updated 3 weeks ago
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆328Updated last year
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆157Updated last year
• zaixizhang / PocketGen
  PocketGen (Nature Machine Intelligence 24): Generating Full-Atom Ligand-Binding Protein Pockets
  ☆185Updated 2 months ago
• westlake-repl / Denovo-Pinal
  Text-guided protein design
  ☆72Updated 2 months ago