HICAI-ZJU / DePLMLinks
☆15Updated 10 months ago
Alternatives and similar repositories for DePLM
Users that are interested in DePLM are comparing it to the libraries listed below
Sorting:
- ☆31Updated last year
- VenusFSFP: Few-Shot Protein Fitness Prediction☆94Updated last month
- Predicting mutational effects on protein-protein binding via a side-chain diffusion probabilistic model (NeurIPS 2023 Poster)☆37Updated last year
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆66Updated last month
- ☆116Updated 3 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 10 months ago
- Evaluating Protein Binding Interfaces with Transformer Networks☆47Updated last year
- ☆44Updated 4 months ago
- Sequence-Structure-Surface Model for Protein Fitness Prediction (S3F)☆44Updated 10 months ago
- Code for humanization of antibody and nanobody☆56Updated last month
- 🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…☆76Updated 4 months ago
- ☆24Updated last year
- ☆76Updated 7 months ago
- This is the official repository of paper - GeoAB: Towards Realistic Antibody Design and Reliable Affinity Maturation (ICML2024)☆40Updated last year
- ☆49Updated 3 weeks ago
- Calculate the RMSD between two antibody structure (including nanobody and antibody).☆11Updated 2 years ago
- The first large protein language model trained follows structure instructions.☆84Updated 4 months ago
- Pretrainable geometric graph neural network for antibody affinity maturation☆63Updated 6 months ago
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆119Updated 7 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated last year
- ISMB-24/Bioinformatics: Tertiary Structure-based RNA Inverse Folding with Generative Diffusion Models☆52Updated 10 months ago
- ☆71Updated last month
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆74Updated last month
- ☆21Updated 9 months ago
- Official repository of ReactZyme☆36Updated 11 months ago
- The official code repository of "OmniESI: A unified framework for enzyme-substrate interaction prediction with progressive conditional de…☆19Updated last month
- [NeurIPS 2024] MSA generative pretraining for advancing protein structure prediction☆33Updated 6 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- ☆61Updated last year
- ☆37Updated 11 months ago