Prot2Text-V2: Protein Function Prediction with Multimodal Contrastive Alignment
☆41Oct 23, 2025Updated 4 months ago
Alternatives and similar repositories for Prot2Text-V2
Users that are interested in Prot2Text-V2 are comparing it to the libraries listed below
Sorting:
- ☆39Jun 9, 2025Updated 9 months ago
- ☆13Jul 24, 2025Updated 7 months ago
- ☆15Feb 27, 2026Updated 3 weeks ago
- A collection of AWESOME things about LLM-Centric-Molecular-Discovery.☆24May 20, 2025Updated 10 months ago
- Code for InstructBioMol, implementing the Nature Machine Intelligence paper "Advancing Biomolecular Understanding and Design Following Hu…☆31Aug 2, 2025Updated 7 months ago
- Finding patch of conserved amino acid sites in 3D structure☆13Apr 13, 2025Updated 11 months ago
- Source code for ACL 2024 paper: "ProtT3: Protein-to-Text Generation for Text-based Protein Understanding"☆52May 27, 2024Updated last year
- ☆16Apr 29, 2020Updated 5 years ago
- Gigabase: Synthetic Biology Cell Modeling Project☆19Nov 3, 2013Updated 12 years ago
- Pytorch version of Continuous Language Generative Flow (ACL 2021)☆11Sep 14, 2021Updated 4 years ago
- Code for the paper "OneProt: Towards Multi-Modal Protein Foundation Models"☆22Oct 31, 2025Updated 4 months ago
- ☆13May 12, 2025Updated 10 months ago
- ☆12Jul 2, 2025Updated 8 months ago
- ☆19Jul 31, 2025Updated 7 months ago
- Benchmarking scripts for Gaia☆14Apr 10, 2025Updated 11 months ago
- EnzyDock: Protein–Ligand Docking of Multiple Reactive States along a Reaction Coordinate in Enzymes☆18Sep 5, 2024Updated last year
- reasoning model trained using GRPO towards rosetta REF2015 for protein stability☆101Oct 16, 2025Updated 5 months ago
- Modular Genome Assembly, Annotation and Assessment Pipeline☆21Updated this week
- Python Modeling Interface☆14Dec 18, 2025Updated 3 months ago
- This is the official code for MolReasoner: Toward Effective and Interpretable Reasoning for Molecular LLMs☆44Aug 28, 2025Updated 6 months ago
- Flexibility-conditioned protein structure design☆32Mar 10, 2026Updated last week
- ☆12Feb 14, 2024Updated 2 years ago
- ESMDynamic repo☆22Feb 25, 2026Updated 3 weeks ago
- ☆15Jul 21, 2023Updated 2 years ago
- An atlas of CRISPR-Cas systems from systematic genome mining☆25Aug 5, 2025Updated 7 months ago
- [ICLR 2025] Hotspot-Driven Peptide Design via Multi-Fragment Autoregressive Extension☆19May 5, 2025Updated 10 months ago
- J-BHI 2024: Exploiting Hierarchical Interactions for Protein Surface Learning☆17Jan 21, 2024Updated 2 years ago
- ☆16Apr 19, 2021Updated 4 years ago
- The first large protein language model trained follows structure instructions.☆93May 20, 2025Updated 10 months ago
- DualBind is a 3D structure-based deep learning model with a dual-loss framework for accurate and fast protein-ligand binding affinity pre…☆15Oct 21, 2025Updated 5 months ago
- ☆23May 7, 2025Updated 10 months ago
- ☆11Dec 15, 2023Updated 2 years ago
- A python script for PyMol to make protein-ligand interaction images.☆18Apr 1, 2025Updated 11 months ago
- R humanize functions☆13Apr 4, 2018Updated 7 years ago
- ☆16Sep 15, 2025Updated 6 months ago
- Using Rotamer Interaction Fields from RIFGen/Dock in python☆17May 2, 2021Updated 4 years ago
- The official code respository for "Crystalformer: Infinitely Connected Attention for Periodic Structure Encoding" (ICLR 2024)☆28Mar 8, 2025Updated last year
- ☆14Dec 8, 2022Updated 3 years ago
- ☆18May 30, 2025Updated 9 months ago