mahdip72 / prot2token
This is the official repository of Prot2Token paper.
☆23Updated last week
Alternatives and similar repositories for prot2token:
Users that are interested in prot2token are comparing it to the libraries listed below
- S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure☆53Updated 3 weeks ago
- open source code for Tencent tFold☆81Updated 3 weeks ago
- ☆18Updated 2 weeks ago
- ☆68Updated 4 years ago
- ☆48Updated last year
- This repo contains the codes for our paper "End-to-End Full-Atom Antibody Design"☆100Updated 10 months ago
- SaprotHub: Making Protein Modeling Accessible to All Biologists☆93Updated this week
- Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.☆28Updated last month
- Antibody-specific masked language model☆47Updated last year
- Sequence-to-drug concept adds a perspective on drug design. It can serve as an alternative method to SBDD, particularly for proteins that…☆59Updated last year
- Fitness landscapes for antibodies☆60Updated last month
- ☆84Updated 3 months ago
- ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)☆86Updated last year
- ☆119Updated last year
- ☆96Updated 7 months ago
- ☆61Updated last week
- ☆37Updated 11 months ago
- Antibody paratope prediction using Graph Neural Networks with minimal feature vectors☆34Updated last year
- Nature Computational Science: RhoDesign is a structure-to-sequence model for RNA design.☆28Updated 3 months ago
- A novel graph neural network strategy with the Vina distance optimization terms to predict protein-ligand binding affinity☆29Updated 9 months ago
- ☆15Updated 4 months ago
- ☆79Updated 2 years ago
- ☆32Updated 4 years ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆79Updated 2 months ago
- GraphSite: protein-DNA binding site prediction using graph transformer and predicted protein structures☆60Updated 6 months ago
- webserver☆23Updated 2 months ago
- ☆67Updated last year
- ☆45Updated last year
- ☆52Updated 10 months ago
- ☆118Updated 3 months ago