Alternatives and similar repositories for MMSite

Users that are interested in MMSite are comparing it to the libraries listed below

• jsunn-y / CARE
  CARE: a Benchmark Suite for the Classification and Retrieval of Enzymes
  ☆40Updated 7 months ago
• bzho3923 / ProtLGN
  ☆33Updated last year
• tyang816 / ProtSolM
  📈 Fusion of sequence, structure and feature information to improve protein solubility prediction (IEEE BIBM 2024).
  ☆24Updated 8 months ago
• duolinwang / S-PLM
  S-PLM: Structure-aware Protein Language Model via Contrastive Learning between Sequence and Structure
  ☆74Updated 3 weeks ago
• AlexanderKroll / kcat_prediction
  ☆22Updated 2 years ago
• luo-group / MODIFY
  ML-optimized library design with improved fitness and diversity for protein engineering
  ☆36Updated 2 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆39Updated last year
• ai4protein / ProtSSN
  🧬 Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2…
  ☆80Updated 8 months ago
• huifengzhao / RAPiDock
  ☆75Updated 2 months ago
• moritzgls / ESM-Effect
  ☆16Updated 11 months ago
• WeiLab-Biology / DeepProSite
  ☆34Updated 2 years ago
• ruofanjin / AttABseq
  ☆18Updated last year
• protddg-bench / protddg-bench
  Scoring methods for predicting the DDG upon protein mutation
  ☆16Updated 2 years ago
• Junjie-Zhu / IDPFold
  Precise Generation of Conformational Ensembles for Intrinsically Disordered Proteins with IDPFold
  ☆24Updated last year
• liuyf020419 / SCUBA-D
  ☆61Updated last year
• Gonglab-THU / GeoStab
  ☆39Updated last year
• bigict / ProDESIGN-LE
  An accurate and efficient protein sequence design approach
  ☆26Updated 10 months ago
• ZhonghuiGu / HEAL
  ☆59Updated last year
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆68Updated 4 months ago
• wenjiegroup / ProMEP
  Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning
  ☆69Updated 5 months ago
• YAndrewL / CLAPE
  contrastive learning and pre-trained encoder for protein-ligand binding sites prediction
  ☆36Updated 6 months ago
• Kuhlman-Lab / evopro
  ☆94Updated 3 months ago
• ak422 / DDAffinity
  ☆24Updated 7 months ago
• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆46Updated 2 months ago
• ddd9898 / DeepNano
  Repository for paper Nanobody–antigen interaction prediction with ensemble deep learning and prompt-based protein language models.
  ☆42Updated last year
• Gonglab-THU / SPIRED-Fitness
  ☆46Updated 7 months ago
• bl-2633 / GAT-GO
  ☆13Updated 3 years ago
• kiharalab / Domain-PFP
  Domain-PFP is a self-supervised method to predict protein functions from the domains
  ☆14Updated 2 years ago
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆60Updated 2 years ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆60Updated 8 months ago